Gene : Bradi5g18450 B. distachyon v3.1
Defline:  (1 of 2) PTHR17985 - SER/THR-RICH PROTEIN T10 IN DGCR REGION Genomic Order:  2132
Name:  ? Bradi5g18450 Secondary Identifier:  ? PAC:32809599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g18450 0.5kb upstream 0.5kb upstream 4506 true Bd5: 21606703-21611208 Brachypodium distachyon
Bradi5g18450 0.5kb upstream 0.5kb upstream 500 false Bd5: 21606703-21607202 Brachypodium distachyon
Bradi5g18450 0.5kb downstream 0.5kb downstream 4506 true Bd5: 21607203-21611708 Brachypodium distachyon
Bradi5g18450 0.5kb downstream 0.5kb downstream 500 false Bd5: 21611209-21611708 Brachypodium distachyon
Bradi5g18450 1.0kb upstream 1.0kb upstream 5006 true Bd5: 21606203-21611208 Brachypodium distachyon
Bradi5g18450 1.0kb upstream 1.0kb upstream 1000 false Bd5: 21606203-21607202 Brachypodium distachyon
Bradi5g18450 1.0kb downstream 1.0kb downstream 5006 true Bd5: 21607203-21612208 Brachypodium distachyon
Bradi5g18450 1.0kb downstream 1.0kb downstream 1000 false Bd5: 21611209-21612208 Brachypodium distachyon
Bradi5g18450 2.0kb upstream 2.0kb upstream 6006 true Bd5: 21605203-21611208 Brachypodium distachyon
Bradi5g18450 2.0kb upstream 2.0kb upstream 2000 false Bd5: 21605203-21607202 Brachypodium distachyon
Bradi5g18450 2.0kb downstream 2.0kb downstream 6006 true Bd5: 21607203-21613208 Brachypodium distachyon
Bradi5g18450 2.0kb downstream 2.0kb downstream 2000 false Bd5: 21611209-21613208 Brachypodium distachyon
Bradi5g18450 5.0kb upstream 5.0kb upstream 9006 true Bd5: 21602203-21611208 Brachypodium distachyon
Bradi5g18450 5.0kb upstream 5.0kb upstream 5000 false Bd5: 21602203-21607202 Brachypodium distachyon
Bradi5g18450 5.0kb downstream 5.0kb downstream 9006 true Bd5: 21607203-21616208 Brachypodium distachyon
Bradi5g18450 5.0kb downstream 5.0kb downstream 5000 false Bd5: 21611209-21616208 Brachypodium distachyon
Bradi5g18450 10.0kb upstream 10.0kb upstream 14006 true Bd5: 21597203-21611208 Brachypodium distachyon
Bradi5g18450 10.0kb upstream 10.0kb upstream 10000 false Bd5: 21597203-21607202 Brachypodium distachyon
Bradi5g18450 10.0kb downstream 10.0kb downstream 14006 true Bd5: 21607203-21621208 Brachypodium distachyon
Bradi5g18450 10.0kb downstream 10.0kb downstream 10000 false Bd5: 21611209-21621208 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570098 5269 Grass View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.269        
cufflinks 1.558        
cufflinks 2.45        
cufflinks 1.647        
cufflinks 1.104       Low
cufflinks 1.503        
cufflinks 1.704        
cufflinks 1.529        
cufflinks 1.479        
cufflinks 3.782       High
cufflinks 1.821        
cufflinks 1.498        
cufflinks 1.821        
cufflinks 1.596        
cufflinks 1.724        
cufflinks 1.418       Low
cufflinks 1.576        
cufflinks 2.909       High
cufflinks 2.489        
cufflinks 1.436        
cufflinks 2.74       High
cufflinks 2.59        
cufflinks 1.284       Low
cufflinks 1.437        
cufflinks 1.393       Low
cufflinks 3.124       High
cufflinks 2.436        
cufflinks 2.992       High
cufflinks 2.645       High
cufflinks 2.101        

0 Strain