Gene : Bradi4g29280 B. distachyon v3.1
Defline:  (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 Genomic Order:  3761
Name:  ? Bradi4g29280 Secondary Identifier:  ? PAC:32791481
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g29280 0.5kb upstream 0.5kb upstream 4917 true Bd4: 34607499-34612415 Brachypodium distachyon
Bradi4g29280 0.5kb upstream 0.5kb upstream 500 false Bd4: 34611916-34612415 Brachypodium distachyon
Bradi4g29280 0.5kb downstream 0.5kb downstream 4917 true Bd4: 34606999-34611915 Brachypodium distachyon
Bradi4g29280 0.5kb downstream 0.5kb downstream 500 false Bd4: 34606999-34607498 Brachypodium distachyon
Bradi4g29280 1.0kb upstream 1.0kb upstream 5417 true Bd4: 34607499-34612915 Brachypodium distachyon
Bradi4g29280 1.0kb upstream 1.0kb upstream 1000 false Bd4: 34611916-34612915 Brachypodium distachyon
Bradi4g29280 1.0kb downstream 1.0kb downstream 5417 true Bd4: 34606499-34611915 Brachypodium distachyon
Bradi4g29280 1.0kb downstream 1.0kb downstream 1000 false Bd4: 34606499-34607498 Brachypodium distachyon
Bradi4g29280 2.0kb upstream 2.0kb upstream 6417 true Bd4: 34607499-34613915 Brachypodium distachyon
Bradi4g29280 2.0kb upstream 2.0kb upstream 2000 false Bd4: 34611916-34613915 Brachypodium distachyon
Bradi4g29280 2.0kb downstream 2.0kb downstream 6417 true Bd4: 34605499-34611915 Brachypodium distachyon
Bradi4g29280 2.0kb downstream 2.0kb downstream 2000 false Bd4: 34605499-34607498 Brachypodium distachyon
Bradi4g29280 5.0kb upstream 5.0kb upstream 9417 true Bd4: 34607499-34616915 Brachypodium distachyon
Bradi4g29280 5.0kb upstream 5.0kb upstream 5000 false Bd4: 34611916-34616915 Brachypodium distachyon
Bradi4g29280 5.0kb downstream 5.0kb downstream 9417 true Bd4: 34602499-34611915 Brachypodium distachyon
Bradi4g29280 5.0kb downstream 5.0kb downstream 5000 false Bd4: 34602499-34607498 Brachypodium distachyon
Bradi4g29280 10.0kb upstream 10.0kb upstream 14417 true Bd4: 34607499-34621915 Brachypodium distachyon
Bradi4g29280 10.0kb upstream 10.0kb upstream 10000 false Bd4: 34611916-34621915 Brachypodium distachyon
Bradi4g29280 10.0kb downstream 10.0kb downstream 14417 true Bd4: 34597499-34611915 Brachypodium distachyon
Bradi4g29280 10.0kb downstream 10.0kb downstream 10000 false Bd4: 34597499-34607498 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576361 5269 Grass View MSA
122048746 5273 Angiosperm View MSA
121311093 5274 Embryophyte View MSA
123348440 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.492        
cufflinks 0.327        
cufflinks 0.312        
cufflinks 0.373        
cufflinks 0.43        
cufflinks 0.309        
cufflinks 0.351        
cufflinks 0.255       Low
cufflinks 0.235       Low
cufflinks 0.459        
cufflinks 0.455        
cufflinks 0.284        
cufflinks 0.265       Low
cufflinks 0.385        
cufflinks 0.419        
cufflinks 0.366        
cufflinks 0.39        
cufflinks 0.58       High
cufflinks 0.708       High
cufflinks 1.541       High
cufflinks 0.54        
cufflinks 0.317        
cufflinks 0.254       Low
cufflinks 0.307        
cufflinks 0.342        
cufflinks 0.443        
cufflinks 0.345        
cufflinks 0.432        
cufflinks 0.339        
cufflinks 0.46        

0 Strain