Gene : Bradi3g09901 B. distachyon v3.1
Defline:  (1 of 1) 6.3.4.19 - tRNA(Ile)-lysidine synthetase / Isoleucine-specific transfer ribonucleate lysidine synthetase Genomic Order:  1274
Name:  ? Bradi3g09901 Secondary Identifier:  ? PAC:32813624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g09901 0.5kb upstream 0.5kb upstream 7830 true Bd3: 8111087-8118916 Brachypodium distachyon
Bradi3g09901 0.5kb upstream 0.5kb upstream 500 false Bd3: 8111087-8111586 Brachypodium distachyon
Bradi3g09901 0.5kb downstream 0.5kb downstream 7830 true Bd3: 8111587-8119416 Brachypodium distachyon
Bradi3g09901 0.5kb downstream 0.5kb downstream 500 false Bd3: 8118917-8119416 Brachypodium distachyon
Bradi3g09901 1.0kb upstream 1.0kb upstream 8330 true Bd3: 8110587-8118916 Brachypodium distachyon
Bradi3g09901 1.0kb upstream 1.0kb upstream 1000 false Bd3: 8110587-8111586 Brachypodium distachyon
Bradi3g09901 1.0kb downstream 1.0kb downstream 8330 true Bd3: 8111587-8119916 Brachypodium distachyon
Bradi3g09901 1.0kb downstream 1.0kb downstream 1000 false Bd3: 8118917-8119916 Brachypodium distachyon
Bradi3g09901 2.0kb upstream 2.0kb upstream 9330 true Bd3: 8109587-8118916 Brachypodium distachyon
Bradi3g09901 2.0kb upstream 2.0kb upstream 2000 false Bd3: 8109587-8111586 Brachypodium distachyon
Bradi3g09901 2.0kb downstream 2.0kb downstream 9330 true Bd3: 8111587-8120916 Brachypodium distachyon
Bradi3g09901 2.0kb downstream 2.0kb downstream 2000 false Bd3: 8118917-8120916 Brachypodium distachyon
Bradi3g09901 5.0kb upstream 5.0kb upstream 12330 true Bd3: 8106587-8118916 Brachypodium distachyon
Bradi3g09901 5.0kb upstream 5.0kb upstream 5000 false Bd3: 8106587-8111586 Brachypodium distachyon
Bradi3g09901 5.0kb downstream 5.0kb downstream 12330 true Bd3: 8111587-8123916 Brachypodium distachyon
Bradi3g09901 5.0kb downstream 5.0kb downstream 5000 false Bd3: 8118917-8123916 Brachypodium distachyon
Bradi3g09901 10.0kb upstream 10.0kb upstream 17330 true Bd3: 8101587-8118916 Brachypodium distachyon
Bradi3g09901 10.0kb upstream 10.0kb upstream 10000 false Bd3: 8101587-8111586 Brachypodium distachyon
Bradi3g09901 10.0kb downstream 10.0kb downstream 17330 true Bd3: 8111587-8128916 Brachypodium distachyon
Bradi3g09901 10.0kb downstream 10.0kb downstream 10000 false Bd3: 8118917-8128916 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026304 5273 Angiosperm View MSA
124572710 5269 Grass View MSA
121345916 5274 Embryophyte View MSA
123380288 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.968        
cufflinks 2.01       High
cufflinks 1.723        
cufflinks 1.723        
cufflinks 0.608       Low
cufflinks 1.772        
cufflinks 1.639        
cufflinks 1.485        
cufflinks 1.742        
cufflinks 1.141        
cufflinks 1.527        
cufflinks 1.571        
cufflinks 1.242        
cufflinks 1.194        
cufflinks 0.914        
cufflinks 1.837        
cufflinks 0.933        
cufflinks 0.872        
cufflinks 0.749        
cufflinks 0.454       Low
cufflinks 0.734       Low
cufflinks 1.666        
cufflinks 1.409        
cufflinks 1.531        
cufflinks 1.723        
cufflinks 1.587        
cufflinks 1.272        
cufflinks 1.407        
cufflinks 1.442        
cufflinks 1.454        

0 Strain