Gene : Bradi3g14480 B. distachyon v3.1
Defline:  (1 of 46) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  1792
Name:  ? Bradi3g14480 Secondary Identifier:  ? PAC:32814992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g14480 0.5kb upstream 0.5kb upstream 7199 true Bd3: 12899846-12907044 Brachypodium distachyon
Bradi3g14480 0.5kb upstream 0.5kb upstream 500 false Bd3: 12899846-12900345 Brachypodium distachyon
Bradi3g14480 0.5kb downstream 0.5kb downstream 7199 true Bd3: 12900346-12907544 Brachypodium distachyon
Bradi3g14480 0.5kb downstream 0.5kb downstream 500 false Bd3: 12907045-12907544 Brachypodium distachyon
Bradi3g14480 1.0kb upstream 1.0kb upstream 7699 true Bd3: 12899346-12907044 Brachypodium distachyon
Bradi3g14480 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12899346-12900345 Brachypodium distachyon
Bradi3g14480 1.0kb downstream 1.0kb downstream 7699 true Bd3: 12900346-12908044 Brachypodium distachyon
Bradi3g14480 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12907045-12908044 Brachypodium distachyon
Bradi3g14480 2.0kb upstream 2.0kb upstream 8699 true Bd3: 12898346-12907044 Brachypodium distachyon
Bradi3g14480 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12898346-12900345 Brachypodium distachyon
Bradi3g14480 2.0kb downstream 2.0kb downstream 8699 true Bd3: 12900346-12909044 Brachypodium distachyon
Bradi3g14480 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12907045-12909044 Brachypodium distachyon
Bradi3g14480 5.0kb upstream 5.0kb upstream 11699 true Bd3: 12895346-12907044 Brachypodium distachyon
Bradi3g14480 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12895346-12900345 Brachypodium distachyon
Bradi3g14480 5.0kb downstream 5.0kb downstream 11699 true Bd3: 12900346-12912044 Brachypodium distachyon
Bradi3g14480 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12907045-12912044 Brachypodium distachyon
Bradi3g14480 10.0kb upstream 10.0kb upstream 16699 true Bd3: 12890346-12907044 Brachypodium distachyon
Bradi3g14480 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12890346-12900345 Brachypodium distachyon
Bradi3g14480 10.0kb downstream 10.0kb downstream 16699 true Bd3: 12900346-12917044 Brachypodium distachyon
Bradi3g14480 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12907045-12917044 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573777 5269 Grass View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.204        
cufflinks 7.858        
cufflinks 8.851       High
cufflinks 5.745        
cufflinks 4.106       Low
cufflinks 6.608        
cufflinks 6.709        
cufflinks 6.148        
cufflinks 6.518        
cufflinks 5.498        
cufflinks 7.572        
cufflinks 8.038        
cufflinks 5.246        
cufflinks 4.805       Low
cufflinks 5.282        
cufflinks 7.005        
cufflinks 4.328       Low
cufflinks 10.417       High
cufflinks 6.67        
cufflinks 8.787       High
cufflinks 7.17        
cufflinks 8.81       High
cufflinks 5.91        
cufflinks 5.514        
cufflinks 5.317        
cufflinks 7.731        
cufflinks 7.452        
cufflinks 7.576        
cufflinks 6.983        
cufflinks 9.468       High

0 Strain