Gene : Bradi3g29247 B. distachyon v3.1
Defline:  (1 of 1) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 Genomic Order:  3520
Name:  ? Bradi3g29247 Secondary Identifier:  ? PAC:32819715
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g29247 0.5kb upstream 0.5kb upstream 12613 true Bd3: 30881770-30894382 Brachypodium distachyon
Bradi3g29247 0.5kb upstream 0.5kb upstream 500 false Bd3: 30893883-30894382 Brachypodium distachyon
Bradi3g29247 0.5kb downstream 0.5kb downstream 12613 true Bd3: 30881270-30893882 Brachypodium distachyon
Bradi3g29247 0.5kb downstream 0.5kb downstream 500 false Bd3: 30881270-30881769 Brachypodium distachyon
Bradi3g29247 1.0kb upstream 1.0kb upstream 13113 true Bd3: 30881770-30894882 Brachypodium distachyon
Bradi3g29247 1.0kb upstream 1.0kb upstream 1000 false Bd3: 30893883-30894882 Brachypodium distachyon
Bradi3g29247 1.0kb downstream 1.0kb downstream 13113 true Bd3: 30880770-30893882 Brachypodium distachyon
Bradi3g29247 1.0kb downstream 1.0kb downstream 1000 false Bd3: 30880770-30881769 Brachypodium distachyon
Bradi3g29247 2.0kb upstream 2.0kb upstream 14113 true Bd3: 30881770-30895882 Brachypodium distachyon
Bradi3g29247 2.0kb upstream 2.0kb upstream 2000 false Bd3: 30893883-30895882 Brachypodium distachyon
Bradi3g29247 2.0kb downstream 2.0kb downstream 14113 true Bd3: 30879770-30893882 Brachypodium distachyon
Bradi3g29247 2.0kb downstream 2.0kb downstream 2000 false Bd3: 30879770-30881769 Brachypodium distachyon
Bradi3g29247 5.0kb upstream 5.0kb upstream 17113 true Bd3: 30881770-30898882 Brachypodium distachyon
Bradi3g29247 5.0kb upstream 5.0kb upstream 5000 false Bd3: 30893883-30898882 Brachypodium distachyon
Bradi3g29247 5.0kb downstream 5.0kb downstream 17113 true Bd3: 30876770-30893882 Brachypodium distachyon
Bradi3g29247 5.0kb downstream 5.0kb downstream 5000 false Bd3: 30876770-30881769 Brachypodium distachyon
Bradi3g29247 10.0kb upstream 10.0kb upstream 22113 true Bd3: 30881770-30903882 Brachypodium distachyon
Bradi3g29247 10.0kb upstream 10.0kb upstream 10000 false Bd3: 30893883-30903882 Brachypodium distachyon
Bradi3g29247 10.0kb downstream 10.0kb downstream 22113 true Bd3: 30871770-30893882 Brachypodium distachyon
Bradi3g29247 10.0kb downstream 10.0kb downstream 10000 false Bd3: 30871770-30881769 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580566 5269 Grass View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.862        
cufflinks 1.041        
cufflinks 0.974        
cufflinks 0.738        
cufflinks 0.267       Low
cufflinks 0.94        
cufflinks 0.895        
cufflinks 0.795        
cufflinks 0.943        
cufflinks 0.573        
cufflinks 0.924        
cufflinks 0.833        
cufflinks 0.638        
cufflinks 0.655        
cufflinks 0.514        
cufflinks 0.981        
cufflinks 0.601        
cufflinks 1.136       High
cufflinks 0.792        
cufflinks 0.395       Low
cufflinks 0.602        
cufflinks 1.09       High
cufflinks 0.757        
cufflinks 0.721        
cufflinks 0.781        
cufflinks 0.867        
cufflinks 0.738        
cufflinks 0.834        
cufflinks 0.826        
cufflinks 0.829        

0 Strain