Gene : Bradi4g24170 B. distachyon v3.1
Defline:  (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) Genomic Order:  3072
Name:  ? Bradi4g24170 Secondary Identifier:  ? PAC:32790982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g24170 0.5kb upstream 0.5kb upstream 8574 true Bd4: 29163557-29172130 Brachypodium distachyon
Bradi4g24170 0.5kb upstream 0.5kb upstream 500 false Bd4: 29163557-29164056 Brachypodium distachyon
Bradi4g24170 0.5kb downstream 0.5kb downstream 8574 true Bd4: 29164057-29172630 Brachypodium distachyon
Bradi4g24170 0.5kb downstream 0.5kb downstream 500 false Bd4: 29172131-29172630 Brachypodium distachyon
Bradi4g24170 1.0kb upstream 1.0kb upstream 9074 true Bd4: 29163057-29172130 Brachypodium distachyon
Bradi4g24170 1.0kb upstream 1.0kb upstream 1000 false Bd4: 29163057-29164056 Brachypodium distachyon
Bradi4g24170 1.0kb downstream 1.0kb downstream 9074 true Bd4: 29164057-29173130 Brachypodium distachyon
Bradi4g24170 1.0kb downstream 1.0kb downstream 1000 false Bd4: 29172131-29173130 Brachypodium distachyon
Bradi4g24170 2.0kb upstream 2.0kb upstream 10074 true Bd4: 29162057-29172130 Brachypodium distachyon
Bradi4g24170 2.0kb upstream 2.0kb upstream 2000 false Bd4: 29162057-29164056 Brachypodium distachyon
Bradi4g24170 2.0kb downstream 2.0kb downstream 10074 true Bd4: 29164057-29174130 Brachypodium distachyon
Bradi4g24170 2.0kb downstream 2.0kb downstream 2000 false Bd4: 29172131-29174130 Brachypodium distachyon
Bradi4g24170 5.0kb upstream 5.0kb upstream 13074 true Bd4: 29159057-29172130 Brachypodium distachyon
Bradi4g24170 5.0kb upstream 5.0kb upstream 5000 false Bd4: 29159057-29164056 Brachypodium distachyon
Bradi4g24170 5.0kb downstream 5.0kb downstream 13074 true Bd4: 29164057-29177130 Brachypodium distachyon
Bradi4g24170 5.0kb downstream 5.0kb downstream 5000 false Bd4: 29172131-29177130 Brachypodium distachyon
Bradi4g24170 10.0kb upstream 10.0kb upstream 18074 true Bd4: 29154057-29172130 Brachypodium distachyon
Bradi4g24170 10.0kb upstream 10.0kb upstream 10000 false Bd4: 29154057-29164056 Brachypodium distachyon
Bradi4g24170 10.0kb downstream 10.0kb downstream 18074 true Bd4: 29164057-29182130 Brachypodium distachyon
Bradi4g24170 10.0kb downstream 10.0kb downstream 10000 false Bd4: 29172131-29182130 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582445 5269 Grass View MSA
122043048 5273 Angiosperm View MSA
121343879 5274 Embryophyte View MSA
123425056 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.826        
cufflinks 6.493        
cufflinks 6.023        
cufflinks 4.825        
cufflinks 1.513       Low
cufflinks 6.094        
cufflinks 5.612        
cufflinks 4.867        
cufflinks 5.427        
cufflinks 3.043        
cufflinks 3.289        
cufflinks 5.442        
cufflinks 2.263        
cufflinks 2.239        
cufflinks 2.395        
cufflinks 6.069        
cufflinks 3.162        
cufflinks 10.92       High
cufflinks 3.291        
cufflinks 0.534       Low
cufflinks 3.709        
cufflinks 6.189        
cufflinks 4.643        
cufflinks 4.067        
cufflinks 4.825        
cufflinks 4.543        
cufflinks 2.746        
cufflinks 4.432        
cufflinks 4.552        
cufflinks 5.539        

0 Strain