Gene : Pp3c14_19990 P. patens v3.3
Defline:  (1 of 1) PF00856//PF13771//PF13831 - SET domain (SET) // PHD-like zinc-binding domain (zf-HC5HC2H) // PHD-finger (PHD_2) Genomic Order:  979
Name:  ? Pp3c14_19990 Secondary Identifier:  ? PAC:32959741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_19990 0.5kb upstream 0.5kb upstream 14707 true Chr14: 13085091-13099797 Physcomitrium patens
Pp3c14_19990 0.5kb upstream 0.5kb upstream 500 false Chr14: 13085091-13085590 Physcomitrium patens
Pp3c14_19990 0.5kb downstream 0.5kb downstream 14707 true Chr14: 13085591-13100297 Physcomitrium patens
Pp3c14_19990 0.5kb downstream 0.5kb downstream 500 false Chr14: 13099798-13100297 Physcomitrium patens
Pp3c14_19990 1.0kb upstream 1.0kb upstream 15207 true Chr14: 13084591-13099797 Physcomitrium patens
Pp3c14_19990 1.0kb upstream 1.0kb upstream 1000 false Chr14: 13084591-13085590 Physcomitrium patens
Pp3c14_19990 1.0kb downstream 1.0kb downstream 15207 true Chr14: 13085591-13100797 Physcomitrium patens
Pp3c14_19990 1.0kb downstream 1.0kb downstream 1000 false Chr14: 13099798-13100797 Physcomitrium patens
Pp3c14_19990 2.0kb upstream 2.0kb upstream 16207 true Chr14: 13083591-13099797 Physcomitrium patens
Pp3c14_19990 2.0kb upstream 2.0kb upstream 2000 false Chr14: 13083591-13085590 Physcomitrium patens
Pp3c14_19990 2.0kb downstream 2.0kb downstream 16207 true Chr14: 13085591-13101797 Physcomitrium patens
Pp3c14_19990 2.0kb downstream 2.0kb downstream 2000 false Chr14: 13099798-13101797 Physcomitrium patens
Pp3c14_19990 5.0kb upstream 5.0kb upstream 19207 true Chr14: 13080591-13099797 Physcomitrium patens
Pp3c14_19990 5.0kb upstream 5.0kb upstream 5000 false Chr14: 13080591-13085590 Physcomitrium patens
Pp3c14_19990 5.0kb downstream 5.0kb downstream 19207 true Chr14: 13085591-13104797 Physcomitrium patens
Pp3c14_19990 5.0kb downstream 5.0kb downstream 5000 false Chr14: 13099798-13104797 Physcomitrium patens
Pp3c14_19990 10.0kb upstream 10.0kb upstream 24207 true Chr14: 13075591-13099797 Physcomitrium patens
Pp3c14_19990 10.0kb upstream 10.0kb upstream 10000 false Chr14: 13075591-13085590 Physcomitrium patens
Pp3c14_19990 10.0kb downstream 10.0kb downstream 24207 true Chr14: 13085591-13109797 Physcomitrium patens
Pp3c14_19990 10.0kb downstream 10.0kb downstream 10000 false Chr14: 13099798-13109797 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121349718 5274 Embryophyte View MSA
123381414 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.371        
cufflinks 15.425        
cufflinks 18.583     High  
cufflinks 32.028     High High
cufflinks 20.903     High  
cufflinks 4.966       Low
cufflinks 5.549       Low
cufflinks 10.572        
cufflinks 9.784        
cufflinks 20.455        
cufflinks 24.148     High  
cufflinks 28.307     High High
cufflinks 25.047     High  
cufflinks 32.859     High High
cufflinks 2.961       Low
cufflinks 20.746     High  
cufflinks 9.707        
cufflinks 7.816        
cufflinks 31.273     High High
cufflinks 9.241        
cufflinks 31.064     High High
cufflinks 8.297        
cufflinks 12.339        
cufflinks 17.933        
cufflinks 23.035        
cufflinks 19.154        
cufflinks 3.422       Low
cufflinks 25.894     High  
cufflinks 12.85        
cufflinks 11.215        

0 Strain