Gene : Aqcoe1G028900 A. coerulea v3.1
Defline:  (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  289
Name:  ? Aqcoe1G028900 Secondary Identifier:  ? PAC:33081822
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Aqcoe1G028900 0.5kb upstream 0.5kb upstream 14436 true Chr_01: 1541660-1556095 Aquilegia coerulea
Aqcoe1G028900 0.5kb upstream 0.5kb upstream 500 false Chr_01: 1541660-1542159 Aquilegia coerulea
Aqcoe1G028900 0.5kb downstream 0.5kb downstream 14436 true Chr_01: 1542160-1556595 Aquilegia coerulea
Aqcoe1G028900 0.5kb downstream 0.5kb downstream 500 false Chr_01: 1556096-1556595 Aquilegia coerulea
Aqcoe1G028900 1.0kb upstream 1.0kb upstream 14936 true Chr_01: 1541160-1556095 Aquilegia coerulea
Aqcoe1G028900 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 1541160-1542159 Aquilegia coerulea
Aqcoe1G028900 1.0kb downstream 1.0kb downstream 14936 true Chr_01: 1542160-1557095 Aquilegia coerulea
Aqcoe1G028900 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 1556096-1557095 Aquilegia coerulea
Aqcoe1G028900 2.0kb upstream 2.0kb upstream 15936 true Chr_01: 1540160-1556095 Aquilegia coerulea
Aqcoe1G028900 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 1540160-1542159 Aquilegia coerulea
Aqcoe1G028900 2.0kb downstream 2.0kb downstream 15936 true Chr_01: 1542160-1558095 Aquilegia coerulea
Aqcoe1G028900 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 1556096-1558095 Aquilegia coerulea
Aqcoe1G028900 5.0kb upstream 5.0kb upstream 18936 true Chr_01: 1537160-1556095 Aquilegia coerulea
Aqcoe1G028900 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 1537160-1542159 Aquilegia coerulea
Aqcoe1G028900 5.0kb downstream 5.0kb downstream 18936 true Chr_01: 1542160-1561095 Aquilegia coerulea
Aqcoe1G028900 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 1556096-1561095 Aquilegia coerulea
Aqcoe1G028900 10.0kb upstream 10.0kb upstream 23936 true Chr_01: 1532160-1556095 Aquilegia coerulea
Aqcoe1G028900 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 1532160-1542159 Aquilegia coerulea
Aqcoe1G028900 10.0kb downstream 10.0kb downstream 23936 true Chr_01: 1542160-1566095 Aquilegia coerulea
Aqcoe1G028900 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 1556096-1566095 Aquilegia coerulea

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain