Gene : LOC_Os08g03940 O. sativa v7.0
Defline:  retrotransposon protein, putative, unclassified, expressed Genomic Order:  250
Name:  ? LOC_Os08g03940 Secondary Identifier:  ? PAC:33104281
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os08g03940 0.5kb upstream 0.5kb upstream 3521 true Chr8: 1874549-1878069 Oryza sativa
LOC_Os08g03940 0.5kb upstream 0.5kb upstream 500 false Chr8: 1877570-1878069 Oryza sativa
LOC_Os08g03940 0.5kb downstream 0.5kb downstream 3521 true Chr8: 1874049-1877569 Oryza sativa
LOC_Os08g03940 0.5kb downstream 0.5kb downstream 500 false Chr8: 1874049-1874548 Oryza sativa
LOC_Os08g03940 1.0kb upstream 1.0kb upstream 4021 true Chr8: 1874549-1878569 Oryza sativa
LOC_Os08g03940 1.0kb upstream 1.0kb upstream 1000 false Chr8: 1877570-1878569 Oryza sativa
LOC_Os08g03940 1.0kb downstream 1.0kb downstream 4021 true Chr8: 1873549-1877569 Oryza sativa
LOC_Os08g03940 1.0kb downstream 1.0kb downstream 1000 false Chr8: 1873549-1874548 Oryza sativa
LOC_Os08g03940 2.0kb upstream 2.0kb upstream 5021 true Chr8: 1874549-1879569 Oryza sativa
LOC_Os08g03940 2.0kb upstream 2.0kb upstream 2000 false Chr8: 1877570-1879569 Oryza sativa
LOC_Os08g03940 2.0kb downstream 2.0kb downstream 5021 true Chr8: 1872549-1877569 Oryza sativa
LOC_Os08g03940 2.0kb downstream 2.0kb downstream 2000 false Chr8: 1872549-1874548 Oryza sativa
LOC_Os08g03940 5.0kb upstream 5.0kb upstream 8021 true Chr8: 1874549-1882569 Oryza sativa
LOC_Os08g03940 5.0kb upstream 5.0kb upstream 5000 false Chr8: 1877570-1882569 Oryza sativa
LOC_Os08g03940 5.0kb downstream 5.0kb downstream 8021 true Chr8: 1869549-1877569 Oryza sativa
LOC_Os08g03940 5.0kb downstream 5.0kb downstream 5000 false Chr8: 1869549-1874548 Oryza sativa
LOC_Os08g03940 10.0kb upstream 10.0kb upstream 13021 true Chr8: 1874549-1887569 Oryza sativa
LOC_Os08g03940 10.0kb upstream 10.0kb upstream 10000 false Chr8: 1877570-1887569 Oryza sativa
LOC_Os08g03940 10.0kb downstream 10.0kb downstream 13021 true Chr8: 1864549-1877569 Oryza sativa
LOC_Os08g03940 10.0kb downstream 10.0kb downstream 10000 false Chr8: 1864549-1874548 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027888 5273 Angiosperm View MSA
124564734 5269 Grass View MSA
121297470 5274 Embryophyte View MSA
123335525 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain