Protein Domain : IPR000358

Type:  Family Name:  Ribonucleotide reductase small subunit
Description:  Ribonucleotide reductase (RNR), also known as ribonucleoside diphosphate reductase, () [, ] catalyses the reductive synthesisof deoxyribonucleotides from their corresponding ribonucleotides: 2'-deoxyribonucleoside diphosphate + oxidized thioredoxin + H2O = ribonucleoside diphosphate + reduced thioredoxin It provides the precursors necessary for DNA synthesis. RNRs divide into three classes on the basis of their metallocofactor usage. Class I RNRs, found in eukaryotes, bacteria, bacteriophage and viruses, use a diiron-tyrosyl radical, Class II RNRs, found in bacteria,bacteriophage, algae and archaea, use coenzyme B12 (adenosylcobalamin, AdoCbl). Class III RNRs, found inanaerobic bacteria and bacteriophage, use an FeS cluster and S-adenosylmethionine to generate a glycyl radical. Manyorganisms have more than one class of RNR present in their genomes. Ribonucleotide reductase is an oligomeric enzyme composed of a large subunit (700 to 1000 residues) and a small subunit (300 to 400 residues) - class II RNRs are less complex, using the small molecule B12 in place of the small chain []. The small chain binds two iron atoms [] (three Glu, one Asp, and two His areinvolved in metal binding) and contains an active site tyrosine radical. The regions of the sequence that contain the metal-binding residues and the activesite tyrosine are conserved in ribonucleotide reductase small chain from prokaryotes, eukaryotes and viruses. Short Name:  RNR_small

1 Child Features

DB identifier Type Name
IPR026494 Family Ribonucleoside reductase subunit beta, NrdF

1 Contains

DB identifier Type Name
IPR012348 Domain Ribonucleotide reductase-related

3 Cross Referencess

Identifier
PTHR23409
PF00268
PIRSF000355

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0009186 IPR000358
GO:0055114 IPR000358

2 Ontology Annotations

GO Term Gene Name
GO:0009186 IPR000358
GO:0055114 IPR000358

0 Parent Features

856 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
173451 D8RR36 PAC:15414905 Selaginella moellendorffii 347  
evm.TU.contig_43776.1 PAC:16431914 Carica papaya 85  
evm.model.supercontig_16.35 PAC:16410068 Carica papaya 218  
evm.model.supercontig_171.12 PAC:16410896 Carica papaya 330  
29726.m003910 B9RSS1 PAC:16806623 Ricinus communis 342  
30190.m010924 B9RBH6 PAC:16823287 Ricinus communis 329  
Cucsa.156130.1 A0A0A0L8R8 PAC:16964841 Cucumis sativus 329  
orange1.1g023028m PAC:18105849 Citrus sinensis 288  
orange1.1g018948m PAC:18105844 Citrus sinensis 348  
orange1.1g018933m PAC:18105845 Citrus sinensis 348  
orange1.1g020108m PAC:18105848 Citrus sinensis 331  
orange1.1g018959m PAC:18105847 Citrus sinensis 348  
orange1.1g018964m PAC:18105846 Citrus sinensis 348  
orange1.1g040427m A0A067FZP6 PAC:18138231 Citrus sinensis 329  
orange1.1g039934m A0A067DYP7 PAC:18126680 Citrus sinensis 329  
AT3G27060.1 Q9LSD0 PAC:19660956 Arabidopsis thaliana 332  
AT3G23580.1 P50651 PAC:19659134 Arabidopsis thaliana 341  
Thhalv10021074m V4LUF2 PAC:20182429 Eutrema salsugineum 341  
Thhalv10004569m V4KZ87 PAC:20200289 Eutrema salsugineum 331  
Ciclev10026060m V4SR09 PAC:20800379 Citrus clementina 329  
Ciclev10032088m V4T6Z4 PAC:20804747 Citrus clementina 329  
Ciclev10005323m V4RGH5 PAC:20789928 Citrus clementina 348  
Ciclev10005322m V4RGH5 PAC:20789927 Citrus clementina 348  
Lus10004435 PAC:23154268 Linum usitatissimum 352  
Lus10032043 PAC:23161105 Linum usitatissimum 330  
Lus10035209 PAC:23162589 Linum usitatissimum 330  
Potri.010G029800.1 A0A2K1YN21 PAC:26978532 Populus trichocarpa 71  
Potri.001G329700.1 B9GJU5 PAC:27047047 Populus trichocarpa 329  
Potri.017G063900.1 PAC:26984811 Populus trichocarpa 395  
Potri.008G201500.1 B9HMC3 PAC:27039566 Populus trichocarpa 342  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            3286319
            2190093
            8511586
            11875520