GO Term : GO:0005788 endoplasmic reticulum lumen GO

Namespace:  cellular_component Obsolete:  false
description  The volume enclosed by the membranes of the endoplasmic reticulum.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

153 Ontology Annotations

Class GO Term Gene Name Db
OntologyAnnotation GO:0005788 Thhalv10007438m GO
GOAnnotation GO:0005788 Thhalv10007438m.g  
OntologyAnnotation GO:0005788 Potri.005G179000.1 GO
GOAnnotation GO:0005788 Potri.005G179000  
GOAnnotation GO:0005788 Araha.39079s0007  
OntologyAnnotation GO:0005788 Araha.39079s0007.1.p GO
GOAnnotation GO:0005788 Cagra.2306s0023  
OntologyAnnotation GO:0005788 Cagra.2306s0023.1.p GO
OntologyAnnotation GO:0005788 Brara.C02778.1.p GO
GOAnnotation GO:0005788 Brara.C02778  
OntologyAnnotation GO:0005788 Brara.I00193.1.p GO
GOAnnotation GO:0005788 Brara.I00193  
OntologyAnnotation GO:0005788 Bostr.2983s0147.1.p GO
GOAnnotation GO:0005788 Bostr.2983s0147  
GOAnnotation GO:0005788 Bostr.2983s0144  
OntologyAnnotation GO:0005788 Bostr.2983s0144.1.p GO
OntologyAnnotation GO:0005788 Cre02.g098800.t1.2 GO
GOAnnotation GO:0005788 Cre02.g098800  
GOAnnotation GO:0005788 SapurV1A.0046s0010  
OntologyAnnotation GO:0005788 SapurV1A.0046s0010.1.p GO
GOAnnotation GO:0005788 Spipo3G0057800  
OntologyAnnotation GO:0005788 Spipo3G0057800 GO
GOAnnotation GO:0005788 evm_27.TU.AmTr_v1.0_scaffold00025.144  
OntologyAnnotation GO:0005788 evm_27.model.AmTr_v1.0_scaffold00025.144 GO
GOAnnotation GO:0005788 Pahal.H01021  
OntologyAnnotation GO:0005788 Pahal.H01021.1 GO
OntologyAnnotation GO:0005788 LOC_Os11g09280.1 GO
OntologyAnnotation GO:0005788 LOC_Os11g09280.2 GO
GOAnnotation GO:0005788 LOC_Os11g09280  
GOAnnotation GO:0005788 Zosma17g00530  

20 Parents

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0043231 intracellular membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO:0005788 endoplasmic reticulum lumen The volume enclosed by the membranes of the endoplasmic reticulum.
GO:0044464 cell part Any constituent part of a cell, the basic structural and functional unit of all organisms.
GO:0044444 cytoplasmic part Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0044424 intracellular part Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005575 cellular_component The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
GO:0005623 cell The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
GO:0043227 membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0043226 organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
GO:0043229 intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0044422 organelle part Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.
GO:0044446 intracellular organelle part A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
GO:0031974 membrane-enclosed lumen The enclosed volume within a sealed membrane or between two sealed membranes. Encompasses the volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear envelope lumen.
GO:0070013 intracellular organelle lumen An organelle lumen that is part of an intracellular organelle.
GO:0043233 organelle lumen The internal volume enclosed by the membranes of a particular organelle; includes the volume enclosed by a single organelle membrane, e.g. endoplasmic reticulum lumen, or the volume enclosed by the innermost of the two lipid bilayers of an organelle envelope, e.g. nuclear lumen.
GO:0012505 endomembrane system A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.
GO:0044432 endoplasmic reticulum part Any constituent part of the endoplasmic reticulum, the irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae.

29 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0070013 GO:0005788
is_a GO:0044432 GO:0005788
is_a GO:0044446 GO:0005788
is_a GO:0044424 GO:0005788
is_a GO:0043233 GO:0005788
part of GO:0005622 GO:0005788
part of GO:0005623 GO:0005788
is_a GO:0044464 GO:0005788
is_a GO:0044444 GO:0005788
is_a GO:0044422 GO:0005788
part of GO:0012505 GO:0005788
part of GO:0005737 GO:0005788
is_a GO:0005575 GO:0005788
is_a GO:0031974 GO:0005788
part of GO:0043231 GO:0005788
part of GO:0044464 GO:0005788
part of GO:0043229 GO:0005788
part of GO:0044444 GO:0005788
part of GO:0005783 GO:0005788
part of GO:0043227 GO:0005788
part of GO:0043226 GO:0005788
part of GO:0044424 GO:0005788
part of GO:0005575 GO:0005788
is_a GO:0005788 GO:0014803
is_a GO:0005788 GO:0014804
is_a GO:0005788 GO:0033018
part of GO:0005788 GO:0034099
is_a GO:0005788 GO:0048237
is_a GO:0005788 GO:0048238

5 Synonyms

Name Type
endoplasmic reticulum cisterna synonym
cisternal lumen synonym
ER lumen synonym
ER cisterna synonym
GO:0016022 alt_id