Gene : Thhalv10011941m.g E. salsugineum v1.0
Defline:  (1 of 6) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  1050
Name:  ? Thhalv10011941m.g Secondary Identifier:  ? PAC:20184717
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011941m.g 0.5kb upstream 0.5kb upstream 1088 true scaffold_7: 11867019-11868106 Eutrema salsugineum
Thhalv10011941m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11867019-11867518 Eutrema salsugineum
Thhalv10011941m.g 0.5kb downstream 0.5kb downstream 1088 true scaffold_7: 11867519-11868606 Eutrema salsugineum
Thhalv10011941m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 11868107-11868606 Eutrema salsugineum
Thhalv10011941m.g 1.0kb upstream 1.0kb upstream 1588 true scaffold_7: 11866519-11868106 Eutrema salsugineum
Thhalv10011941m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11866519-11867518 Eutrema salsugineum
Thhalv10011941m.g 1.0kb downstream 1.0kb downstream 1588 true scaffold_7: 11867519-11869106 Eutrema salsugineum
Thhalv10011941m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 11868107-11869106 Eutrema salsugineum
Thhalv10011941m.g 2.0kb upstream 2.0kb upstream 2588 true scaffold_7: 11865519-11868106 Eutrema salsugineum
Thhalv10011941m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11865519-11867518 Eutrema salsugineum
Thhalv10011941m.g 2.0kb downstream 2.0kb downstream 2588 true scaffold_7: 11867519-11870106 Eutrema salsugineum
Thhalv10011941m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 11868107-11870106 Eutrema salsugineum
Thhalv10011941m.g 5.0kb upstream 5.0kb upstream 5588 true scaffold_7: 11862519-11868106 Eutrema salsugineum
Thhalv10011941m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11862519-11867518 Eutrema salsugineum
Thhalv10011941m.g 5.0kb downstream 5.0kb downstream 5588 true scaffold_7: 11867519-11873106 Eutrema salsugineum
Thhalv10011941m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 11868107-11873106 Eutrema salsugineum
Thhalv10011941m.g 10.0kb upstream 10.0kb upstream 10588 true scaffold_7: 11857519-11868106 Eutrema salsugineum
Thhalv10011941m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 11857519-11867518 Eutrema salsugineum
Thhalv10011941m.g 10.0kb downstream 10.0kb downstream 10588 true scaffold_7: 11867519-11878106 Eutrema salsugineum
Thhalv10011941m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 11868107-11878106 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122359173 5261 Brassicaceae Singleton cluster - no MSA
123839181 5264 Brassicales-Malvales View MSA
124322572 5266 SBM View MSA
124250343 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain