Gene : Gorai.002G177800 G. raimondii v2.1
Defline:  (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) Genomic Order:  1778
Name:  ? Gorai.002G177800 Secondary Identifier:  ? PAC:26793138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G177800 0.5kb upstream 0.5kb upstream 1593 true Chr02: 45894323-45895915 Gossypium raimondii
Gorai.002G177800 0.5kb upstream 0.5kb upstream 500 false Chr02: 45894323-45894822 Gossypium raimondii
Gorai.002G177800 0.5kb downstream 0.5kb downstream 1593 true Chr02: 45894823-45896415 Gossypium raimondii
Gorai.002G177800 0.5kb downstream 0.5kb downstream 500 false Chr02: 45895916-45896415 Gossypium raimondii
Gorai.002G177800 1.0kb upstream 1.0kb upstream 2093 true Chr02: 45893823-45895915 Gossypium raimondii
Gorai.002G177800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45893823-45894822 Gossypium raimondii
Gorai.002G177800 1.0kb downstream 1.0kb downstream 2093 true Chr02: 45894823-45896915 Gossypium raimondii
Gorai.002G177800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45895916-45896915 Gossypium raimondii
Gorai.002G177800 2.0kb upstream 2.0kb upstream 3093 true Chr02: 45892823-45895915 Gossypium raimondii
Gorai.002G177800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45892823-45894822 Gossypium raimondii
Gorai.002G177800 2.0kb downstream 2.0kb downstream 3093 true Chr02: 45894823-45897915 Gossypium raimondii
Gorai.002G177800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45895916-45897915 Gossypium raimondii
Gorai.002G177800 5.0kb upstream 5.0kb upstream 6093 true Chr02: 45889823-45895915 Gossypium raimondii
Gorai.002G177800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45889823-45894822 Gossypium raimondii
Gorai.002G177800 5.0kb downstream 5.0kb downstream 6093 true Chr02: 45894823-45900915 Gossypium raimondii
Gorai.002G177800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45895916-45900915 Gossypium raimondii
Gorai.002G177800 10.0kb upstream 10.0kb upstream 11093 true Chr02: 45884823-45895915 Gossypium raimondii
Gorai.002G177800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45884823-45894822 Gossypium raimondii
Gorai.002G177800 10.0kb downstream 10.0kb downstream 11093 true Chr02: 45894823-45905915 Gossypium raimondii
Gorai.002G177800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45895916-45905915 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838027 5264 Brassicales-Malvales View MSA
124350809 5266 SBM View MSA
124249328 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain