56 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| Ciclev10013956m.g | (1 of 4) PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON | C. clementina v1.0 |
495
 |
scaffold_10: 221810-222304 | |
| Ciclev10017902m.g | (1 of 32) PTHR11439 - GAG-POL-RELATED RETROTRANSPOSON | C. clementina v1.0 |
483
|
scaffold_2: 5856810-5857292 | |
| Gorai.001G222900 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
393
|
Chr01: 45508350-45508742 | |
| Gorai.001G251200 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
2157
|
Chr01: 52256452-52258608 | |
| Gorai.002G106200 | (1 of 1) PTHR11439//PTHR11439:SF172 - GAG-POL-RELATED RETROTRANSPOSON | G. raimondii v2.1 |
357
|
Chr02: 14213435-14213791 | |
| Gorai.002G159800 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
408
|
Chr02: 35533641-35534048 | |
| Gorai.002G177800 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
1093
|
Chr02: 45894823-45895915 | |
| Gorai.003G168400 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
604
|
Chr03: 43895946-43896549 | |
| Gorai.004G068900 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
384
|
Chr04: 7242729-7243112 | |
| Gorai.004G098500 | G. raimondii v2.1 |
300
|
Chr04: 16541241-16541540 | ||
| Gorai.012G038500 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
312
|
Chr12: 4809970-4810281 | |
| Gorai.005G090700 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
285
|
Chr05: 12238009-12238293 | |
| Gorai.008G081000 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
249
|
Chr08: 15793514-15793762 | |
| Gorai.010G168500 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
357
|
Chr10: 48831626-48831982 | |
| Gorai.010G182200 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
366
|
Chr10: 53032559-53032924 | |
| Gorai.007G269000 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
508
|
Chr07: 45123588-45124095 | |
| Gorai.011G153600 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
574
|
Chr11: 26392864-26393437 | |
| Gorai.011G157900 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
312
|
Chr11: 27828831-27829142 | |
| Gorai.011G093600 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
459
|
Chr11: 10174914-10175372 | |
| Gorai.011G188300 | (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | G. raimondii v2.1 |
426
|
Chr11: 44931773-44932198 | |
| Thecc1EG003782 | (1 of 85) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
807
|
scaffold_1: 26612739-26613545 | |
| Thecc1EG043808 | (1 of 85) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
9915
|
scaffold_10r: 10069257-10079171 | |
| Thecc1EG043614 | (1 of 1) PTHR11439//PTHR11439:SF167 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
985
|
scaffold_10r: 8095920-8096904 | |
| Thecc1EG044857 | (1 of 4) PF13961//PF14223 - Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
776
|
scaffold_10r: 19911590-19912365 | |
| Thecc1EG008719 | (1 of 102) PF00098 - Zinc knuckle (zf-CCHC) | T. cacao v1.1 |
16281
|
scaffold_2: 16369055-16385335 | |
| Thecc1EG008448 | (1 of 102) PF00098 - Zinc knuckle (zf-CCHC) | T. cacao v1.1 |
4605
|
scaffold_2: 13760860-13765464 | |
| Thecc1EG008921 | (1 of 47) PF13961 - Domain of unknown function (DUF4219) (DUF4219) | T. cacao v1.1 |
893
|
scaffold_2: 18215300-18216192 | |
| Thecc1EG010085 | (1 of 85) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
4795
|
scaffold_2: 30510252-30515046 | |
| Thecc1EG009959 | Uncharacterized protein | T. cacao v1.1 |
3044
|
scaffold_2: 29299967-29303010 | |
| Thecc1EG010552 | (1 of 85) PF14223 - gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
2745
|
scaffold_2: 34267438-34270182 |
56 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| Gorai.004G068900.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.012G038500.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Thecc1EG024059t1 | T. cacao v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 33 | 5266 | SBM |
| Thecc1EG040215t1 | T. cacao v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 33 | 5266 | SBM |
| Thecc1EG044857t1 | T. cacao v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 33 | 5266 | SBM |
| Thecc1EG036560t1 | T. cacao v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 33 | 5266 | SBM |
| Thecc1EG035735t1 | T. cacao v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 33 | 5266 | SBM |
| Thecc1EG008448t1 | T. cacao v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 33 | 5266 | SBM |
| Thecc1EG008719t1 | T. cacao v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 33 | 5266 | SBM |
| Thecc1EG010085t1 | T. cacao v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 33 | 5266 | SBM |
| Cagra.17072s0001.1.p | C. grandiflora v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 2 | 5266 | SBM |
| Ciclev10017902m | C. clementina v1.0 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 2 | 5266 | SBM |
| Ciclev10013956m | C. clementina v1.0 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 2 | 5266 | SBM |
| Gorai.002G159800.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.011G153600.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.011G188300.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.008G081000.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.004G098500.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.011G157900.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.003G168400.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.002G177800.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.001G222900.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.007G269000.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.005G090700.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.002G106200.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.010G168500.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.010G182200.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.001G251200.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Gorai.011G093600.1 | G. raimondii v2.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 18 | 5266 | SBM |
| Thecc1EG017784t1 | T. cacao v1.1 | 124350809 | PF14223 - gag-polypeptide of LTR copia-type (UBN2) | 33 | 5266 | SBM |
