Gene : Gorai.011G093600 G. raimondii v2.1
Defline:  (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) Genomic Order:  936
Name:  ? Gorai.011G093600 Secondary Identifier:  ? PAC:26812539
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G093600 0.5kb upstream 0.5kb upstream 959 true Chr11: 10174414-10175372 Gossypium raimondii
Gorai.011G093600 0.5kb upstream 0.5kb upstream 500 false Chr11: 10174414-10174913 Gossypium raimondii
Gorai.011G093600 0.5kb downstream 0.5kb downstream 959 true Chr11: 10174914-10175872 Gossypium raimondii
Gorai.011G093600 0.5kb downstream 0.5kb downstream 500 false Chr11: 10175373-10175872 Gossypium raimondii
Gorai.011G093600 1.0kb upstream 1.0kb upstream 1459 true Chr11: 10173914-10175372 Gossypium raimondii
Gorai.011G093600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10173914-10174913 Gossypium raimondii
Gorai.011G093600 1.0kb downstream 1.0kb downstream 1459 true Chr11: 10174914-10176372 Gossypium raimondii
Gorai.011G093600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10175373-10176372 Gossypium raimondii
Gorai.011G093600 2.0kb upstream 2.0kb upstream 2459 true Chr11: 10172914-10175372 Gossypium raimondii
Gorai.011G093600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10172914-10174913 Gossypium raimondii
Gorai.011G093600 2.0kb downstream 2.0kb downstream 2459 true Chr11: 10174914-10177372 Gossypium raimondii
Gorai.011G093600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10175373-10177372 Gossypium raimondii
Gorai.011G093600 5.0kb upstream 5.0kb upstream 5459 true Chr11: 10169914-10175372 Gossypium raimondii
Gorai.011G093600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10169914-10174913 Gossypium raimondii
Gorai.011G093600 5.0kb downstream 5.0kb downstream 5459 true Chr11: 10174914-10180372 Gossypium raimondii
Gorai.011G093600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10175373-10180372 Gossypium raimondii
Gorai.011G093600 10.0kb upstream 10.0kb upstream 10459 true Chr11: 10164914-10175372 Gossypium raimondii
Gorai.011G093600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10164914-10174913 Gossypium raimondii
Gorai.011G093600 10.0kb downstream 10.0kb downstream 10459 true Chr11: 10174914-10185372 Gossypium raimondii
Gorai.011G093600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10175373-10185372 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838027 5264 Brassicales-Malvales View MSA
124350809 5266 SBM View MSA
124249328 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain