Gene : Gorai.011G157900 G. raimondii v2.1
Defline:  (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) Genomic Order:  1579
Name:  ? Gorai.011G157900 Secondary Identifier:  ? PAC:26811270
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G157900 0.5kb upstream 0.5kb upstream 812 true Chr11: 27828331-27829142 Gossypium raimondii
Gorai.011G157900 0.5kb upstream 0.5kb upstream 500 false Chr11: 27828331-27828830 Gossypium raimondii
Gorai.011G157900 0.5kb downstream 0.5kb downstream 812 true Chr11: 27828831-27829642 Gossypium raimondii
Gorai.011G157900 0.5kb downstream 0.5kb downstream 500 false Chr11: 27829143-27829642 Gossypium raimondii
Gorai.011G157900 1.0kb upstream 1.0kb upstream 1312 true Chr11: 27827831-27829142 Gossypium raimondii
Gorai.011G157900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 27827831-27828830 Gossypium raimondii
Gorai.011G157900 1.0kb downstream 1.0kb downstream 1312 true Chr11: 27828831-27830142 Gossypium raimondii
Gorai.011G157900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 27829143-27830142 Gossypium raimondii
Gorai.011G157900 2.0kb upstream 2.0kb upstream 2312 true Chr11: 27826831-27829142 Gossypium raimondii
Gorai.011G157900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 27826831-27828830 Gossypium raimondii
Gorai.011G157900 2.0kb downstream 2.0kb downstream 2312 true Chr11: 27828831-27831142 Gossypium raimondii
Gorai.011G157900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 27829143-27831142 Gossypium raimondii
Gorai.011G157900 5.0kb upstream 5.0kb upstream 5312 true Chr11: 27823831-27829142 Gossypium raimondii
Gorai.011G157900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 27823831-27828830 Gossypium raimondii
Gorai.011G157900 5.0kb downstream 5.0kb downstream 5312 true Chr11: 27828831-27834142 Gossypium raimondii
Gorai.011G157900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 27829143-27834142 Gossypium raimondii
Gorai.011G157900 10.0kb upstream 10.0kb upstream 10312 true Chr11: 27818831-27829142 Gossypium raimondii
Gorai.011G157900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 27818831-27828830 Gossypium raimondii
Gorai.011G157900 10.0kb downstream 10.0kb downstream 10312 true Chr11: 27828831-27839142 Gossypium raimondii
Gorai.011G157900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 27829143-27839142 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838027 5264 Brassicales-Malvales View MSA
124350809 5266 SBM View MSA
124249328 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain