Gene : Gorai.010G168500 G. raimondii v2.1
Defline:  (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) Genomic Order:  1685
Name:  ? Gorai.010G168500 Secondary Identifier:  ? PAC:26758439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G168500 0.5kb upstream 0.5kb upstream 857 true Chr10: 48831126-48831982 Gossypium raimondii
Gorai.010G168500 0.5kb upstream 0.5kb upstream 500 false Chr10: 48831126-48831625 Gossypium raimondii
Gorai.010G168500 0.5kb downstream 0.5kb downstream 857 true Chr10: 48831626-48832482 Gossypium raimondii
Gorai.010G168500 0.5kb downstream 0.5kb downstream 500 false Chr10: 48831983-48832482 Gossypium raimondii
Gorai.010G168500 1.0kb upstream 1.0kb upstream 1357 true Chr10: 48830626-48831982 Gossypium raimondii
Gorai.010G168500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48830626-48831625 Gossypium raimondii
Gorai.010G168500 1.0kb downstream 1.0kb downstream 1357 true Chr10: 48831626-48832982 Gossypium raimondii
Gorai.010G168500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48831983-48832982 Gossypium raimondii
Gorai.010G168500 2.0kb upstream 2.0kb upstream 2357 true Chr10: 48829626-48831982 Gossypium raimondii
Gorai.010G168500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48829626-48831625 Gossypium raimondii
Gorai.010G168500 2.0kb downstream 2.0kb downstream 2357 true Chr10: 48831626-48833982 Gossypium raimondii
Gorai.010G168500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48831983-48833982 Gossypium raimondii
Gorai.010G168500 5.0kb upstream 5.0kb upstream 5357 true Chr10: 48826626-48831982 Gossypium raimondii
Gorai.010G168500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48826626-48831625 Gossypium raimondii
Gorai.010G168500 5.0kb downstream 5.0kb downstream 5357 true Chr10: 48831626-48836982 Gossypium raimondii
Gorai.010G168500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48831983-48836982 Gossypium raimondii
Gorai.010G168500 10.0kb upstream 10.0kb upstream 10357 true Chr10: 48821626-48831982 Gossypium raimondii
Gorai.010G168500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48821626-48831625 Gossypium raimondii
Gorai.010G168500 10.0kb downstream 10.0kb downstream 10357 true Chr10: 48831626-48841982 Gossypium raimondii
Gorai.010G168500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48831983-48841982 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838027 5264 Brassicales-Malvales View MSA
124350809 5266 SBM View MSA
124249328 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain