Gene : Gorai.002G195100 G. raimondii v2.1
Defline:  (1 of 8) PTHR11544 - COLD SHOCK DOMAIN CONTAINING PROTEINS Genomic Order:  1951
Name:  ? Gorai.002G195100 Secondary Identifier:  ? PAC:26791793
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G195100 0.5kb upstream 0.5kb upstream 4255 true Chr02: 52798113-52802367 Gossypium raimondii
Gorai.002G195100 0.5kb upstream 0.5kb upstream 500 false Chr02: 52798113-52798612 Gossypium raimondii
Gorai.002G195100 0.5kb downstream 0.5kb downstream 4255 true Chr02: 52798613-52802867 Gossypium raimondii
Gorai.002G195100 0.5kb downstream 0.5kb downstream 500 false Chr02: 52802368-52802867 Gossypium raimondii
Gorai.002G195100 1.0kb upstream 1.0kb upstream 4755 true Chr02: 52797613-52802367 Gossypium raimondii
Gorai.002G195100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 52797613-52798612 Gossypium raimondii
Gorai.002G195100 1.0kb downstream 1.0kb downstream 4755 true Chr02: 52798613-52803367 Gossypium raimondii
Gorai.002G195100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 52802368-52803367 Gossypium raimondii
Gorai.002G195100 2.0kb upstream 2.0kb upstream 5755 true Chr02: 52796613-52802367 Gossypium raimondii
Gorai.002G195100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 52796613-52798612 Gossypium raimondii
Gorai.002G195100 2.0kb downstream 2.0kb downstream 5755 true Chr02: 52798613-52804367 Gossypium raimondii
Gorai.002G195100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 52802368-52804367 Gossypium raimondii
Gorai.002G195100 5.0kb upstream 5.0kb upstream 8755 true Chr02: 52793613-52802367 Gossypium raimondii
Gorai.002G195100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 52793613-52798612 Gossypium raimondii
Gorai.002G195100 5.0kb downstream 5.0kb downstream 8755 true Chr02: 52798613-52807367 Gossypium raimondii
Gorai.002G195100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 52802368-52807367 Gossypium raimondii
Gorai.002G195100 10.0kb upstream 10.0kb upstream 13755 true Chr02: 52788613-52802367 Gossypium raimondii
Gorai.002G195100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 52788613-52798612 Gossypium raimondii
Gorai.002G195100 10.0kb downstream 10.0kb downstream 13755 true Chr02: 52798613-52812367 Gossypium raimondii
Gorai.002G195100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 52802368-52812367 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835211 5264 Brassicales-Malvales View MSA
124339573 5266 SBM View MSA
124250533 5268 Malvidae View MSA
124063967 5270 Rosid View MSA
123747748 5271 Pentapetalae View MSA
122791026 5272 Eudicot View MSA
122042982 5273 Angiosperm View MSA
121347174 5274 Embryophyte View MSA
123428407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain