Gene : Gorai.005G253200 G. raimondii v2.1
Defline:  (1 of 8) PTHR11544 - COLD SHOCK DOMAIN CONTAINING PROTEINS Genomic Order:  2532
Name:  ? Gorai.005G253200 Secondary Identifier:  ? PAC:26801498
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G253200 0.5kb upstream 0.5kb upstream 1161 true Chr05: 63097345-63098505 Gossypium raimondii
Gorai.005G253200 0.5kb upstream 0.5kb upstream 500 false Chr05: 63097345-63097844 Gossypium raimondii
Gorai.005G253200 0.5kb downstream 0.5kb downstream 1161 true Chr05: 63097845-63099005 Gossypium raimondii
Gorai.005G253200 0.5kb downstream 0.5kb downstream 500 false Chr05: 63098506-63099005 Gossypium raimondii
Gorai.005G253200 1.0kb upstream 1.0kb upstream 1661 true Chr05: 63096845-63098505 Gossypium raimondii
Gorai.005G253200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 63096845-63097844 Gossypium raimondii
Gorai.005G253200 1.0kb downstream 1.0kb downstream 1661 true Chr05: 63097845-63099505 Gossypium raimondii
Gorai.005G253200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 63098506-63099505 Gossypium raimondii
Gorai.005G253200 2.0kb upstream 2.0kb upstream 2661 true Chr05: 63095845-63098505 Gossypium raimondii
Gorai.005G253200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 63095845-63097844 Gossypium raimondii
Gorai.005G253200 2.0kb downstream 2.0kb downstream 2661 true Chr05: 63097845-63100505 Gossypium raimondii
Gorai.005G253200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 63098506-63100505 Gossypium raimondii
Gorai.005G253200 5.0kb upstream 5.0kb upstream 5661 true Chr05: 63092845-63098505 Gossypium raimondii
Gorai.005G253200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 63092845-63097844 Gossypium raimondii
Gorai.005G253200 5.0kb downstream 5.0kb downstream 5661 true Chr05: 63097845-63103505 Gossypium raimondii
Gorai.005G253200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 63098506-63103505 Gossypium raimondii
Gorai.005G253200 10.0kb upstream 10.0kb upstream 10661 true Chr05: 63087845-63098505 Gossypium raimondii
Gorai.005G253200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 63087845-63097844 Gossypium raimondii
Gorai.005G253200 10.0kb downstream 10.0kb downstream 10661 true Chr05: 63097845-63108505 Gossypium raimondii
Gorai.005G253200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 63098506-63108505 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029141 5273 Angiosperm View MSA
123806925 5264 Brassicales-Malvales Singleton cluster - no MSA
124303813 5266 SBM Singleton cluster - no MSA
124154433 5268 Malvidae Singleton cluster - no MSA
124051493 5270 Rosid View MSA
123753367 5271 Pentapetalae View MSA
122775077 5272 Eudicot View MSA
121298527 5274 Embryophyte View MSA
123428407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain