Gene : Gorai.007G113900 G. raimondii v2.1
Defline:  (1 of 3) PTHR12802:SF43 - PROTEIN CCA1-RELATED Genomic Order:  1139
Name:  ? Gorai.007G113900 Secondary Identifier:  ? PAC:26781209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G113900 0.5kb upstream 0.5kb upstream 6597 true Chr07: 8852674-8859270 Gossypium raimondii
Gorai.007G113900 0.5kb upstream 0.5kb upstream 500 false Chr07: 8852674-8853173 Gossypium raimondii
Gorai.007G113900 0.5kb downstream 0.5kb downstream 6597 true Chr07: 8853174-8859770 Gossypium raimondii
Gorai.007G113900 0.5kb downstream 0.5kb downstream 500 false Chr07: 8859271-8859770 Gossypium raimondii
Gorai.007G113900 1.0kb upstream 1.0kb upstream 7097 true Chr07: 8852174-8859270 Gossypium raimondii
Gorai.007G113900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8852174-8853173 Gossypium raimondii
Gorai.007G113900 1.0kb downstream 1.0kb downstream 7097 true Chr07: 8853174-8860270 Gossypium raimondii
Gorai.007G113900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8859271-8860270 Gossypium raimondii
Gorai.007G113900 2.0kb upstream 2.0kb upstream 8097 true Chr07: 8851174-8859270 Gossypium raimondii
Gorai.007G113900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8851174-8853173 Gossypium raimondii
Gorai.007G113900 2.0kb downstream 2.0kb downstream 8097 true Chr07: 8853174-8861270 Gossypium raimondii
Gorai.007G113900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8859271-8861270 Gossypium raimondii
Gorai.007G113900 5.0kb upstream 5.0kb upstream 11097 true Chr07: 8848174-8859270 Gossypium raimondii
Gorai.007G113900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8848174-8853173 Gossypium raimondii
Gorai.007G113900 5.0kb downstream 5.0kb downstream 11097 true Chr07: 8853174-8864270 Gossypium raimondii
Gorai.007G113900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8859271-8864270 Gossypium raimondii
Gorai.007G113900 10.0kb upstream 10.0kb upstream 16097 true Chr07: 8843174-8859270 Gossypium raimondii
Gorai.007G113900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8843174-8853173 Gossypium raimondii
Gorai.007G113900 10.0kb downstream 10.0kb downstream 16097 true Chr07: 8853174-8869270 Gossypium raimondii
Gorai.007G113900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8859271-8869270 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842452 5264 Brassicales-Malvales View MSA
124323506 5266 SBM View MSA
124169502 5268 Malvidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain