Gene : AL1G48800 A. lyrata v2.1
Defline:  (1 of 3) PTHR15316:SF1 - SPLICING FACTOR 3A SUBUNIT 1 Genomic Order:  3610
Name:  ? AL1G48800 Secondary Identifier:  ? PAC:35935769
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G48800 0.5kb upstream 0.5kb upstream 4455   true scaffold_1: 16073551-16078005 Arabidopsis lyrata
AL1G48800 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 16077506-16078005 Arabidopsis lyrata
AL1G48800 0.5kb downstream 0.5kb downstream 4455   true scaffold_1: 16073051-16077505 Arabidopsis lyrata
AL1G48800 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 16073051-16073550 Arabidopsis lyrata
AL1G48800 1.0kb upstream 1.0kb upstream 4955   true scaffold_1: 16073551-16078505 Arabidopsis lyrata
AL1G48800 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 16077506-16078505 Arabidopsis lyrata
AL1G48800 1.0kb downstream 1.0kb downstream 4955   true scaffold_1: 16072551-16077505 Arabidopsis lyrata
AL1G48800 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 16072551-16073550 Arabidopsis lyrata
AL1G48800 2.0kb upstream 2.0kb upstream 5955   true scaffold_1: 16073551-16079505 Arabidopsis lyrata
AL1G48800 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 16077506-16079505 Arabidopsis lyrata
AL1G48800 2.0kb downstream 2.0kb downstream 5955   true scaffold_1: 16071551-16077505 Arabidopsis lyrata
AL1G48800 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 16071551-16073550 Arabidopsis lyrata
AL1G48800 5.0kb upstream 5.0kb upstream 8955   true scaffold_1: 16073551-16082505 Arabidopsis lyrata
AL1G48800 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 16077506-16082505 Arabidopsis lyrata
AL1G48800 5.0kb downstream 5.0kb downstream 8955   true scaffold_1: 16068551-16077505 Arabidopsis lyrata
AL1G48800 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 16068551-16073550 Arabidopsis lyrata
AL1G48800 10.0kb upstream 10.0kb upstream 13955   true scaffold_1: 16073551-16087505 Arabidopsis lyrata
AL1G48800 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 16077506-16087505 Arabidopsis lyrata
AL1G48800 10.0kb downstream 10.0kb downstream 13955   true scaffold_1: 16063551-16077505 Arabidopsis lyrata
AL1G48800 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 16063551-16073550 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041332 5273 Angiosperm View MSA
122364426 5261 Brassicaceae View MSA
123840698 5264 Brassicales-Malvales View MSA
124342903 5266 SBM View MSA
124237111 5268 Malvidae View MSA
124066763 5270 Rosid View MSA
123748218 5271 Pentapetalae View MSA
122792189 5272 Eudicot View MSA
121344762 5274 Embryophyte View MSA
123425409 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain