Gene : AL1G52080 A. lyrata v2.1
Defline:  (1 of 186) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3886
Name:  ? AL1G52080 Secondary Identifier:  ? PAC:35934060
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G52080 0.5kb upstream 0.5kb upstream 2759   true scaffold_1: 22410364-22413122 Arabidopsis lyrata
AL1G52080 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 22412623-22413122 Arabidopsis lyrata
AL1G52080 0.5kb downstream 0.5kb downstream 2759   true scaffold_1: 22409864-22412622 Arabidopsis lyrata
AL1G52080 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 22409864-22410363 Arabidopsis lyrata
AL1G52080 1.0kb upstream 1.0kb upstream 3259   true scaffold_1: 22410364-22413622 Arabidopsis lyrata
AL1G52080 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 22412623-22413622 Arabidopsis lyrata
AL1G52080 1.0kb downstream 1.0kb downstream 3259   true scaffold_1: 22409364-22412622 Arabidopsis lyrata
AL1G52080 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 22409364-22410363 Arabidopsis lyrata
AL1G52080 2.0kb upstream 2.0kb upstream 4259   true scaffold_1: 22410364-22414622 Arabidopsis lyrata
AL1G52080 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 22412623-22414622 Arabidopsis lyrata
AL1G52080 2.0kb downstream 2.0kb downstream 4259   true scaffold_1: 22408364-22412622 Arabidopsis lyrata
AL1G52080 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 22408364-22410363 Arabidopsis lyrata
AL1G52080 5.0kb upstream 5.0kb upstream 7259   true scaffold_1: 22410364-22417622 Arabidopsis lyrata
AL1G52080 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 22412623-22417622 Arabidopsis lyrata
AL1G52080 5.0kb downstream 5.0kb downstream 7259   true scaffold_1: 22405364-22412622 Arabidopsis lyrata
AL1G52080 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 22405364-22410363 Arabidopsis lyrata
AL1G52080 10.0kb upstream 10.0kb upstream 12259   true scaffold_1: 22410364-22422622 Arabidopsis lyrata
AL1G52080 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 22412623-22422622 Arabidopsis lyrata
AL1G52080 10.0kb downstream 10.0kb downstream 12259   true scaffold_1: 22400364-22412622 Arabidopsis lyrata
AL1G52080 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 22400364-22410363 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372981 5261 Brassicaceae View MSA
123831030 5264 Brassicales-Malvales View MSA
124336473 5266 SBM View MSA
124242018 5268 Malvidae View MSA
124070457 5270 Rosid View MSA
123736471 5271 Pentapetalae View MSA
122786011 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain