Gene : AL2G20580 A. lyrata v2.1
Defline:  (1 of 2) K03040 - DNA-directed RNA polymerase subunit alpha (rpoA) Genomic Order:  917
Name:  ? AL2G20580 Secondary Identifier:  ? PAC:35946198
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G20580 0.5kb upstream 0.5kb upstream 1539   true scaffold_2: 8756707-8758245 Arabidopsis lyrata
AL2G20580 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 8756707-8757206 Arabidopsis lyrata
AL2G20580 0.5kb downstream 0.5kb downstream 1539   true scaffold_2: 8757207-8758745 Arabidopsis lyrata
AL2G20580 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 8758246-8758745 Arabidopsis lyrata
AL2G20580 1.0kb upstream 1.0kb upstream 2039   true scaffold_2: 8756207-8758245 Arabidopsis lyrata
AL2G20580 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 8756207-8757206 Arabidopsis lyrata
AL2G20580 1.0kb downstream 1.0kb downstream 2039   true scaffold_2: 8757207-8759245 Arabidopsis lyrata
AL2G20580 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 8758246-8759245 Arabidopsis lyrata
AL2G20580 2.0kb upstream 2.0kb upstream 3039   true scaffold_2: 8755207-8758245 Arabidopsis lyrata
AL2G20580 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 8755207-8757206 Arabidopsis lyrata
AL2G20580 2.0kb downstream 2.0kb downstream 3039   true scaffold_2: 8757207-8760245 Arabidopsis lyrata
AL2G20580 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 8758246-8760245 Arabidopsis lyrata
AL2G20580 5.0kb upstream 5.0kb upstream 6039   true scaffold_2: 8752207-8758245 Arabidopsis lyrata
AL2G20580 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 8752207-8757206 Arabidopsis lyrata
AL2G20580 5.0kb downstream 5.0kb downstream 6039   true scaffold_2: 8757207-8763245 Arabidopsis lyrata
AL2G20580 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 8758246-8763245 Arabidopsis lyrata
AL2G20580 10.0kb upstream 10.0kb upstream 11039   true scaffold_2: 8747207-8758245 Arabidopsis lyrata
AL2G20580 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 8747207-8757206 Arabidopsis lyrata
AL2G20580 10.0kb downstream 10.0kb downstream 11039   true scaffold_2: 8757207-8768245 Arabidopsis lyrata
AL2G20580 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 8758246-8768245 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029214 5273 Angiosperm View MSA
122332072 5261 Brassicaceae View MSA
123829507 5264 Brassicales-Malvales View MSA
124321604 5266 SBM View MSA
124245148 5268 Malvidae View MSA
124037285 5270 Rosid View MSA
123750855 5271 Pentapetalae View MSA
122773847 5272 Eudicot View MSA
121350838 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain