Gene : AL215U10040 A. lyrata v2.1
Defline:  (1 of 260) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  3
Name:  ? AL215U10040 Secondary Identifier:  ? PAC:35947738
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL215U10040 0.5kb upstream 0.5kb upstream 1915   true scaffold_215: 4567-6481 Arabidopsis lyrata
AL215U10040 0.5kb upstream 0.5kb upstream 500   false scaffold_215: 5982-6481 Arabidopsis lyrata
AL215U10040 0.5kb downstream 0.5kb downstream 1915   true scaffold_215: 4067-5981 Arabidopsis lyrata
AL215U10040 0.5kb downstream 0.5kb downstream 500   false scaffold_215: 4067-4566 Arabidopsis lyrata
AL215U10040 1.0kb upstream 1.0kb upstream 2415   true scaffold_215: 4567-6981 Arabidopsis lyrata
AL215U10040 1.0kb upstream 1.0kb upstream 1000   false scaffold_215: 5982-6981 Arabidopsis lyrata
AL215U10040 1.0kb downstream 1.0kb downstream 2415   true scaffold_215: 3567-5981 Arabidopsis lyrata
AL215U10040 1.0kb downstream 1.0kb downstream 1000   false scaffold_215: 3567-4566 Arabidopsis lyrata
AL215U10040 2.0kb upstream 2.0kb upstream 3415   true scaffold_215: 4567-7981 Arabidopsis lyrata
AL215U10040 2.0kb upstream 2.0kb upstream 2000   false scaffold_215: 5982-7981 Arabidopsis lyrata
AL215U10040 2.0kb downstream 2.0kb downstream 3415   true scaffold_215: 2567-5981 Arabidopsis lyrata
AL215U10040 2.0kb downstream 2.0kb downstream 2000   false scaffold_215: 2567-4566 Arabidopsis lyrata
AL215U10040 5.0kb upstream 5.0kb upstream 6415   true scaffold_215: 4567-10981 Arabidopsis lyrata
AL215U10040 5.0kb upstream 5.0kb upstream 5000   false scaffold_215: 5982-10981 Arabidopsis lyrata
AL215U10040 5.0kb downstream 5.0kb downstream 5981   true scaffold_215: 1-5981 Arabidopsis lyrata
AL215U10040 5.0kb downstream 5.0kb downstream 4566   false scaffold_215: 1-4566 Arabidopsis lyrata
AL215U10040 10.0kb upstream 10.0kb upstream 8105   true scaffold_215: 4567-12671 Arabidopsis lyrata
AL215U10040 10.0kb upstream 10.0kb upstream 6690   false scaffold_215: 5982-12671 Arabidopsis lyrata
AL215U10040 10.0kb downstream 10.0kb downstream 5981   true scaffold_215: 1-5981 Arabidopsis lyrata
AL215U10040 10.0kb downstream 10.0kb downstream 4566   false scaffold_215: 1-4566 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343112 5261 Brassicaceae View MSA
123839350 5264 Brassicales-Malvales View MSA
124340932 5266 SBM View MSA
124238138 5268 Malvidae View MSA
124062704 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain