Gene : AL3G26550 A. lyrata v2.1

Defline:  (1 of 9) K11975 - E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19] (RNF144) Genomic Order:  1573
Name:  ? AL3G26550 Secondary Identifier:  ? PAC:35940323

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G26550 0.5kb upstream 0.5kb upstream 4303   true scaffold_3: 5922864-5927166 Arabidopsis lyrata
AL3G26550 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 5926667-5927166 Arabidopsis lyrata
AL3G26550 0.5kb downstream 0.5kb downstream 4303   true scaffold_3: 5922364-5926666 Arabidopsis lyrata
AL3G26550 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 5922364-5922863 Arabidopsis lyrata
AL3G26550 1.0kb upstream 1.0kb upstream 4803   true scaffold_3: 5922864-5927666 Arabidopsis lyrata
AL3G26550 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 5926667-5927666 Arabidopsis lyrata
AL3G26550 1.0kb downstream 1.0kb downstream 4803   true scaffold_3: 5921864-5926666 Arabidopsis lyrata
AL3G26550 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 5921864-5922863 Arabidopsis lyrata
AL3G26550 2.0kb upstream 2.0kb upstream 5803   true scaffold_3: 5922864-5928666 Arabidopsis lyrata
AL3G26550 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 5926667-5928666 Arabidopsis lyrata
AL3G26550 2.0kb downstream 2.0kb downstream 5803   true scaffold_3: 5920864-5926666 Arabidopsis lyrata
AL3G26550 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 5920864-5922863 Arabidopsis lyrata
AL3G26550 5.0kb upstream 5.0kb upstream 8803   true scaffold_3: 5922864-5931666 Arabidopsis lyrata
AL3G26550 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 5926667-5931666 Arabidopsis lyrata
AL3G26550 5.0kb downstream 5.0kb downstream 8803   true scaffold_3: 5917864-5926666 Arabidopsis lyrata
AL3G26550 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 5917864-5922863 Arabidopsis lyrata
AL3G26550 10.0kb upstream 10.0kb upstream 13803   true scaffold_3: 5922864-5936666 Arabidopsis lyrata
AL3G26550 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 5926667-5936666 Arabidopsis lyrata
AL3G26550 10.0kb downstream 10.0kb downstream 13803   true scaffold_3: 5912864-5926666 Arabidopsis lyrata
AL3G26550 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 5912864-5922863 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366475 5261 Brassicaceae View MSA
123834431 5264 Brassicales-Malvales View MSA
124342738 5266 SBM View MSA
124252111 5268 Malvidae View MSA
124068077 5270 Rosid View MSA
123752192 5271 Pentapetalae View MSA
122796967 5272 Eudicot View MSA
122046828 5273 Angiosperm View MSA
123429065 5275 Viridiplantae View MSA
121348618 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain