Gene : AL3G42760 A. lyrata v2.1

Defline:  (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 Genomic Order:  3094
Name:  ? AL3G42760 Secondary Identifier:  ? PAC:35940469

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G42760 0.5kb upstream 0.5kb upstream 3621   true scaffold_3: 13788211-13791831 Arabidopsis lyrata
AL3G42760 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 13791332-13791831 Arabidopsis lyrata
AL3G42760 0.5kb downstream 0.5kb downstream 3621   true scaffold_3: 13787711-13791331 Arabidopsis lyrata
AL3G42760 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 13787711-13788210 Arabidopsis lyrata
AL3G42760 1.0kb upstream 1.0kb upstream 4121   true scaffold_3: 13788211-13792331 Arabidopsis lyrata
AL3G42760 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 13791332-13792331 Arabidopsis lyrata
AL3G42760 1.0kb downstream 1.0kb downstream 4121   true scaffold_3: 13787211-13791331 Arabidopsis lyrata
AL3G42760 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 13787211-13788210 Arabidopsis lyrata
AL3G42760 2.0kb upstream 2.0kb upstream 5121   true scaffold_3: 13788211-13793331 Arabidopsis lyrata
AL3G42760 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 13791332-13793331 Arabidopsis lyrata
AL3G42760 2.0kb downstream 2.0kb downstream 5121   true scaffold_3: 13786211-13791331 Arabidopsis lyrata
AL3G42760 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 13786211-13788210 Arabidopsis lyrata
AL3G42760 5.0kb upstream 5.0kb upstream 8121   true scaffold_3: 13788211-13796331 Arabidopsis lyrata
AL3G42760 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 13791332-13796331 Arabidopsis lyrata
AL3G42760 5.0kb downstream 5.0kb downstream 8121   true scaffold_3: 13783211-13791331 Arabidopsis lyrata
AL3G42760 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 13783211-13788210 Arabidopsis lyrata
AL3G42760 10.0kb upstream 10.0kb upstream 13121   true scaffold_3: 13788211-13801331 Arabidopsis lyrata
AL3G42760 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 13791332-13801331 Arabidopsis lyrata
AL3G42760 10.0kb downstream 10.0kb downstream 13121   true scaffold_3: 13778211-13791331 Arabidopsis lyrata
AL3G42760 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 13778211-13788210 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375737 5261 Brassicaceae View MSA
123834101 5264 Brassicales-Malvales View MSA
124346427 5266 SBM View MSA
124244625 5268 Malvidae View MSA
124072958 5270 Rosid View MSA
123741560 5271 Pentapetalae View MSA
122786150 5272 Eudicot View MSA
122046764 5273 Angiosperm View MSA
121351034 5274 Embryophyte View MSA
123381984 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain