Gene : AL4G13800 A. lyrata v2.1

Defline:  (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED Genomic Order:  331
Name:  ? AL4G13800 Secondary Identifier:  ? PAC:35924560

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G13800 0.5kb upstream 0.5kb upstream 1934   true scaffold_4: 2083655-2085588 Arabidopsis lyrata
AL4G13800 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 2085089-2085588 Arabidopsis lyrata
AL4G13800 0.5kb downstream 0.5kb downstream 1934   true scaffold_4: 2083155-2085088 Arabidopsis lyrata
AL4G13800 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 2083155-2083654 Arabidopsis lyrata
AL4G13800 1.0kb upstream 1.0kb upstream 2434   true scaffold_4: 2083655-2086088 Arabidopsis lyrata
AL4G13800 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 2085089-2086088 Arabidopsis lyrata
AL4G13800 1.0kb downstream 1.0kb downstream 2434   true scaffold_4: 2082655-2085088 Arabidopsis lyrata
AL4G13800 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 2082655-2083654 Arabidopsis lyrata
AL4G13800 2.0kb upstream 2.0kb upstream 3434   true scaffold_4: 2083655-2087088 Arabidopsis lyrata
AL4G13800 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 2085089-2087088 Arabidopsis lyrata
AL4G13800 2.0kb downstream 2.0kb downstream 3434   true scaffold_4: 2081655-2085088 Arabidopsis lyrata
AL4G13800 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 2081655-2083654 Arabidopsis lyrata
AL4G13800 5.0kb upstream 5.0kb upstream 6434   true scaffold_4: 2083655-2090088 Arabidopsis lyrata
AL4G13800 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 2085089-2090088 Arabidopsis lyrata
AL4G13800 5.0kb downstream 5.0kb downstream 6434   true scaffold_4: 2078655-2085088 Arabidopsis lyrata
AL4G13800 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 2078655-2083654 Arabidopsis lyrata
AL4G13800 10.0kb upstream 10.0kb upstream 11434   true scaffold_4: 2083655-2095088 Arabidopsis lyrata
AL4G13800 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 2085089-2095088 Arabidopsis lyrata
AL4G13800 10.0kb downstream 10.0kb downstream 11434   true scaffold_4: 2073655-2085088 Arabidopsis lyrata
AL4G13800 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 2073655-2083654 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363032 5261 Brassicaceae View MSA
123827533 5264 Brassicales-Malvales View MSA
124340698 5266 SBM View MSA
124252660 5268 Malvidae View MSA
124066658 5270 Rosid View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain