Gene : AL5G40390 A. lyrata v2.1
Defline:  (1 of 21) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain Genomic Order:  2722
Name:  ? AL5G40390 Secondary Identifier:  ? PAC:35920526
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G40390 0.5kb upstream 0.5kb upstream 3742   true scaffold_5: 18965414-18969155 Arabidopsis lyrata
AL5G40390 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18968656-18969155 Arabidopsis lyrata
AL5G40390 0.5kb downstream 0.5kb downstream 3742   true scaffold_5: 18964914-18968655 Arabidopsis lyrata
AL5G40390 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18964914-18965413 Arabidopsis lyrata
AL5G40390 1.0kb upstream 1.0kb upstream 4242   true scaffold_5: 18965414-18969655 Arabidopsis lyrata
AL5G40390 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18968656-18969655 Arabidopsis lyrata
AL5G40390 1.0kb downstream 1.0kb downstream 4242   true scaffold_5: 18964414-18968655 Arabidopsis lyrata
AL5G40390 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18964414-18965413 Arabidopsis lyrata
AL5G40390 2.0kb upstream 2.0kb upstream 5242   true scaffold_5: 18965414-18970655 Arabidopsis lyrata
AL5G40390 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18968656-18970655 Arabidopsis lyrata
AL5G40390 2.0kb downstream 2.0kb downstream 5242   true scaffold_5: 18963414-18968655 Arabidopsis lyrata
AL5G40390 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18963414-18965413 Arabidopsis lyrata
AL5G40390 5.0kb upstream 5.0kb upstream 8242   true scaffold_5: 18965414-18973655 Arabidopsis lyrata
AL5G40390 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18968656-18973655 Arabidopsis lyrata
AL5G40390 5.0kb downstream 5.0kb downstream 8242   true scaffold_5: 18960414-18968655 Arabidopsis lyrata
AL5G40390 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18960414-18965413 Arabidopsis lyrata
AL5G40390 10.0kb upstream 10.0kb upstream 13242   true scaffold_5: 18965414-18978655 Arabidopsis lyrata
AL5G40390 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18968656-18978655 Arabidopsis lyrata
AL5G40390 10.0kb downstream 10.0kb downstream 13242   true scaffold_5: 18955414-18968655 Arabidopsis lyrata
AL5G40390 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18955414-18965413 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369467 5261 Brassicaceae View MSA
123832360 5264 Brassicales-Malvales View MSA
124345736 5266 SBM View MSA
124249777 5268 Malvidae View MSA
124073016 5270 Rosid View MSA
123747024 5271 Pentapetalae View MSA
122797594 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain