Gene : AL6G12670 A. lyrata v2.1
Defline:  (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) Genomic Order:  248
Name:  ? AL6G12670 Secondary Identifier:  ? PAC:35927807
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G12670 0.5kb upstream 0.5kb upstream 3818   true scaffold_6: 954851-958668 Arabidopsis lyrata
AL6G12670 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 958169-958668 Arabidopsis lyrata
AL6G12670 0.5kb downstream 0.5kb downstream 3818   true scaffold_6: 954351-958168 Arabidopsis lyrata
AL6G12670 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 954351-954850 Arabidopsis lyrata
AL6G12670 1.0kb upstream 1.0kb upstream 4318   true scaffold_6: 954851-959168 Arabidopsis lyrata
AL6G12670 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 958169-959168 Arabidopsis lyrata
AL6G12670 1.0kb downstream 1.0kb downstream 4318   true scaffold_6: 953851-958168 Arabidopsis lyrata
AL6G12670 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 953851-954850 Arabidopsis lyrata
AL6G12670 2.0kb upstream 2.0kb upstream 5318   true scaffold_6: 954851-960168 Arabidopsis lyrata
AL6G12670 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 958169-960168 Arabidopsis lyrata
AL6G12670 2.0kb downstream 2.0kb downstream 5318   true scaffold_6: 952851-958168 Arabidopsis lyrata
AL6G12670 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 952851-954850 Arabidopsis lyrata
AL6G12670 5.0kb upstream 5.0kb upstream 8318   true scaffold_6: 954851-963168 Arabidopsis lyrata
AL6G12670 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 958169-963168 Arabidopsis lyrata
AL6G12670 5.0kb downstream 5.0kb downstream 8318   true scaffold_6: 949851-958168 Arabidopsis lyrata
AL6G12670 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 949851-954850 Arabidopsis lyrata
AL6G12670 10.0kb upstream 10.0kb upstream 13318   true scaffold_6: 954851-968168 Arabidopsis lyrata
AL6G12670 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 958169-968168 Arabidopsis lyrata
AL6G12670 10.0kb downstream 10.0kb downstream 13318   true scaffold_6: 944851-958168 Arabidopsis lyrata
AL6G12670 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 944851-954850 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362151 5261 Brassicaceae View MSA
123838879 5264 Brassicales-Malvales View MSA
124336663 5266 SBM View MSA
124250896 5268 Malvidae View MSA
124066929 5270 Rosid View MSA
123746983 5271 Pentapetalae View MSA
122795799 5272 Eudicot View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain