Protein Family : ATPase, AAA-type, CDC48 protein 124336663

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  21

21 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g003623m.g (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. sinensis v1.1 5396   scaffold00242: 222652-228047
AT5G03340 (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) A. thaliana TAIR10 3281   Chr5: 809948-813228
AT3G53230 (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) A. thaliana TAIR10 3322   Chr3: 19723351-19726672
Thhalv10012714m.g (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D E. salsugineum v1.0 3510   scaffold_2: 780276-783785
Ciclev10011046m.g (1 of 4) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. clementina v1.0 5357   scaffold_6: 2846627-2851983
Gorai.002G162100 (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D G. raimondii v2.1 5208   Chr02: 37555561-37560768
Gorai.009G415000 (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D G. raimondii v2.1 4762   Chr09: 63731621-63736382
Gorai.006G164800 (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D G. raimondii v2.1 4857   Chr06: 42455610-42460466
Thecc1EG022204 (1 of 2) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) T. cacao v1.1 23740   scaffold_5: 3118482-3142221
Araha.1164s0005 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D A. halleri v1.1 3221   Scaffold1164: 18390-21610
Araha.26535s0001 (1 of 1) PF02933//PF05496//PF07724 - Cell division protein 48 (CDC48), domain 2 (CDC48_2) // Holliday junction DNA helicase ruvB N-terminus (RuvB_N) // AAA domain (Cdc48 subfamily) (AAA_2) A. halleri v1.1 2207   Scaffold26535: 2-2208
Cagra.0612s0046 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. grandiflora v1.1 3706   Scaffold612: 155846-159551
Cagra.14900s0004 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. grandiflora v1.1 3708   Scaffold14900: 8751-12458
Brara.G01576 (1 of 6) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D B. rapa FPsc v1.3 3944   A07: 15662519-15666462
Brara.C00106 (1 of 6) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D B. rapa FPsc v1.3 2990   A03: 443111-446100
Bostr.2128s0119 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D B. stricta v1.2 3807   Scaffold2128: 559761-563567
Bostr.11793s0070 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D B. stricta v1.2 3743   Scaffold11793: 344188-347930
AL5G34110 (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) A. lyrata v2.1 3645   scaffold_5: 16476977-16480621
AL6G12670 (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) A. lyrata v2.1 3318   scaffold_6: 954851-958168
Carub.0005s1976 (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) C. rubella v1.1 3451   scaffold_5: 9866676-9870126
Carub.0006s0215 (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) C. rubella v1.1 3740   scaffold_6: 776599-780338

21 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT3G53230.1 A. thaliana TAIR10 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Araha.26535s0001.1.p A. halleri v1.1 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Cagra.14900s0004.1.p C. grandiflora v1.1 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
orange1.1g003623m C. sinensis v1.1 124336663 ATPase, AAA-type, CDC48 protein 1 5266 SBM
AT5G03340.1 A. thaliana TAIR10 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Thhalv10012714m E. salsugineum v1.0 124336663 ATPase, AAA-type, CDC48 protein 1 5266 SBM
Ciclev10011046m C. clementina v1.0 124336663 ATPase, AAA-type, CDC48 protein 1 5266 SBM
Gorai.006G164800.1 G. raimondii v2.1 124336663 ATPase, AAA-type, CDC48 protein 3 5266 SBM
Gorai.002G162100.1 G. raimondii v2.1 124336663 ATPase, AAA-type, CDC48 protein 3 5266 SBM
Gorai.009G415000.1 G. raimondii v2.1 124336663 ATPase, AAA-type, CDC48 protein 3 5266 SBM
Thecc1EG022204t1 T. cacao v1.1 124336663 ATPase, AAA-type, CDC48 protein 1 5266 SBM
Araha.1164s0005.1.p A. halleri v1.1 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Cagra.0612s0046.1.p C. grandiflora v1.1 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Brara.G01576.1.p B. rapa FPsc v1.3 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Brara.C00106.1.p B. rapa FPsc v1.3 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Bostr.11793s0070.1.p B. stricta v1.2 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Bostr.2128s0119.1.p B. stricta v1.2 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
AL5G34110.t1 A. lyrata v2.1 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
AL6G12670.t1 A. lyrata v2.1 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Carub.0006s0215.1.p C. rubella v1.1 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM
Carub.0005s1976.1.p C. rubella v1.1 124336663 ATPase, AAA-type, CDC48 protein 2 5266 SBM