Gene : Thecc1EG022204 T. cacao v1.1
Defline:  (1 of 2) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) Genomic Order:  615
Name:  ? Thecc1EG022204 Secondary Identifier:  ? PAC:27423929
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022204 0.5kb upstream 0.5kb upstream 24240 true scaffold_5: 3118482-3142721 Theobroma cacao
Thecc1EG022204 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3142222-3142721 Theobroma cacao
Thecc1EG022204 0.5kb downstream 0.5kb downstream 24240 true scaffold_5: 3117982-3142221 Theobroma cacao
Thecc1EG022204 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3117982-3118481 Theobroma cacao
Thecc1EG022204 1.0kb upstream 1.0kb upstream 24740 true scaffold_5: 3118482-3143221 Theobroma cacao
Thecc1EG022204 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3142222-3143221 Theobroma cacao
Thecc1EG022204 1.0kb downstream 1.0kb downstream 24740 true scaffold_5: 3117482-3142221 Theobroma cacao
Thecc1EG022204 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3117482-3118481 Theobroma cacao
Thecc1EG022204 2.0kb upstream 2.0kb upstream 25740 true scaffold_5: 3118482-3144221 Theobroma cacao
Thecc1EG022204 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3142222-3144221 Theobroma cacao
Thecc1EG022204 2.0kb downstream 2.0kb downstream 25740 true scaffold_5: 3116482-3142221 Theobroma cacao
Thecc1EG022204 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3116482-3118481 Theobroma cacao
Thecc1EG022204 5.0kb upstream 5.0kb upstream 28740 true scaffold_5: 3118482-3147221 Theobroma cacao
Thecc1EG022204 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3142222-3147221 Theobroma cacao
Thecc1EG022204 5.0kb downstream 5.0kb downstream 28740 true scaffold_5: 3113482-3142221 Theobroma cacao
Thecc1EG022204 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3113482-3118481 Theobroma cacao
Thecc1EG022204 10.0kb upstream 10.0kb upstream 33740 true scaffold_5: 3118482-3152221 Theobroma cacao
Thecc1EG022204 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3142222-3152221 Theobroma cacao
Thecc1EG022204 10.0kb downstream 10.0kb downstream 33740 true scaffold_5: 3108482-3142221 Theobroma cacao
Thecc1EG022204 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3108482-3118481 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838879 5264 Brassicales-Malvales View MSA
124336663 5266 SBM View MSA
124250896 5268 Malvidae View MSA
124066929 5270 Rosid View MSA
123746983 5271 Pentapetalae View MSA
122795799 5272 Eudicot View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain