Protein Family : ATPase, AAA-type, CDC48 protein 124250896

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  48

48 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30078.t000091 (1 of 1) PF02359//PF02933//PF05496//PF07724 - Cell division protein 48 (CDC48), N-terminal domain (CDC48_N) // Cell division protein 48 (CDC48), domain 2 (CDC48_2) // Holliday junction DNA helicase ruvB N-terminus (RuvB_N) // AAA domain (Cdc48 subfamily) (AAA_2) R. communis v0.1 4357   30078: 576876-581232
30078.t000093 (1 of 5) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) R. communis v0.1 4671   30078: 585171-589841
orange1.1g003620m.g (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. sinensis v1.1 4356   scaffold00061: 190013-194368
orange1.1g003623m.g (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. sinensis v1.1 5396   scaffold00242: 222652-228047
AT5G03340 (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) A. thaliana TAIR10 3281   Chr5: 809948-813228
AT3G09840 (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) A. thaliana TAIR10 CDC48 3713   Chr3: 3019340-3023052
AT3G53230 (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) A. thaliana TAIR10 3322   Chr3: 19723351-19726672
Thhalv10020085m.g (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D E. salsugineum v1.0 3660   scaffold_13: 6375170-6378829
Thhalv10012714m.g (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D E. salsugineum v1.0 3510   scaffold_2: 780276-783785
Ciclev10011046m.g (1 of 4) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. clementina v1.0 5357   scaffold_6: 2846627-2851983
Ciclev10027840m.g (1 of 4) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. clementina v1.0 4709   scaffold_8: 21485234-21489942
Lus10016123.g (1 of 9) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D L. usitatissimum v1.0 3712   scaffold344: 264775-268486
Lus10016124.g (1 of 9) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D L. usitatissimum v1.0 3755   scaffold344: 290933-294687
Lus10021441.g (1 of 9) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D L. usitatissimum v1.0 3662   scaffold612: 361957-365618
Lus10021442.g (1 of 9) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D L. usitatissimum v1.0 3505   scaffold612: 377604-381108
Gorai.002G162100 (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D G. raimondii v2.1 5208   Chr02: 37555561-37560768
Gorai.003G144300 (1 of 1) PF00004//PF02933 - ATPase family associated with various cellular activities (AAA) (AAA) // Cell division protein 48 (CDC48), domain 2 (CDC48_2) G. raimondii v2.1 2664   Chr03: 41041224-41043887
Gorai.009G415000 (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D G. raimondii v2.1 4762   Chr09: 63731621-63736382
Gorai.006G164800 (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D G. raimondii v2.1 4857   Chr06: 42455610-42460466
Thecc1EG022204 (1 of 2) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) T. cacao v1.1 23740   scaffold_5: 3118482-3142221
Thecc1EG042132 (1 of 2) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) T. cacao v1.1 4887   scaffold_9: 41167546-41172432
Araha.1164s0005 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D A. halleri v1.1 3221   Scaffold1164: 18390-21610
Araha.5821s0010 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D A. halleri v1.1 3582   Scaffold5821: 32846-36427
Araha.26535s0001 (1 of 1) PF02933//PF05496//PF07724 - Cell division protein 48 (CDC48), domain 2 (CDC48_2) // Holliday junction DNA helicase ruvB N-terminus (RuvB_N) // AAA domain (Cdc48 subfamily) (AAA_2) A. halleri v1.1 2207   Scaffold26535: 2-2208
Cagra.0612s0046 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. grandiflora v1.1 3706   Scaffold612: 155846-159551
Cagra.2515s0073 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. grandiflora v1.1 3643   Scaffold2515: 225301-228943
Cagra.14900s0004 (1 of 3) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. grandiflora v1.1 3708   Scaffold14900: 8751-12458
Brara.A03507 (1 of 6) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D B. rapa FPsc v1.3 3262   A01: 28593722-28596983
Brara.G01576 (1 of 6) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D B. rapa FPsc v1.3 3944   A07: 15662519-15666462
Brara.C00106 (1 of 6) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D B. rapa FPsc v1.3 2990   A03: 443111-446100

48 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT3G53230.1 A. thaliana TAIR10 124250896 ATPase, AAA-type, CDC48 protein 3 5268 Malvidae
Lus10016123 L. usitatissimum v1.0 124250896 ATPase, AAA-type, CDC48 protein 4 5268 Malvidae
Lus10021441 L. usitatissimum v1.0 124250896 ATPase, AAA-type, CDC48 protein 4 5268 Malvidae
Lus10021442 L. usitatissimum v1.0 124250896 ATPase, AAA-type, CDC48 protein 4 5268 Malvidae
Araha.26535s0001.1.p A. halleri v1.1 124250896 ATPase, AAA-type, CDC48 protein 3 5268 Malvidae
Cagra.14900s0004.1.p C. grandiflora v1.1 124250896 ATPase, AAA-type, CDC48 protein 3 5268 Malvidae
Brara.A03507.1.p B. rapa FPsc v1.3 124250896 ATPase, AAA-type, CDC48 protein 4 5268 Malvidae
Manes.11G150300.1.p M. esculenta v6.1 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
Potri.006G125500.1.p P. trichocarpa v3.1 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
Podel.16G095500.1.p P. deltoides WV94 v2.1 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
30078.m002298 R. communis v0.1 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
30078.m002300 R. communis v0.1 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
orange1.1g003620m C. sinensis v1.1 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
orange1.1g003623m C. sinensis v1.1 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
AT5G03340.1 A. thaliana TAIR10 124250896 ATPase, AAA-type, CDC48 protein 3 5268 Malvidae
AT3G09840.1 A. thaliana TAIR10 124250896 ATPase, AAA-type, CDC48 protein 3 5268 Malvidae
Thhalv10020085m E. salsugineum v1.0 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
Thhalv10012714m E. salsugineum v1.0 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
Ciclev10011046m C. clementina v1.0 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
Ciclev10027840m C. clementina v1.0 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
Lus10016124 L. usitatissimum v1.0 124250896 ATPase, AAA-type, CDC48 protein 4 5268 Malvidae
Gorai.003G144300.1 G. raimondii v2.1 124250896 ATPase, AAA-type, CDC48 protein 4 5268 Malvidae
Gorai.002G162100.1 G. raimondii v2.1 124250896 ATPase, AAA-type, CDC48 protein 4 5268 Malvidae
Gorai.006G164800.1 G. raimondii v2.1 124250896 ATPase, AAA-type, CDC48 protein 4 5268 Malvidae
Gorai.009G415000.1 G. raimondii v2.1 124250896 ATPase, AAA-type, CDC48 protein 4 5268 Malvidae
Thecc1EG022204t1 T. cacao v1.1 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
Thecc1EG042132t1 T. cacao v1.1 124250896 ATPase, AAA-type, CDC48 protein 2 5268 Malvidae
Araha.5821s0010.1.p A. halleri v1.1 124250896 ATPase, AAA-type, CDC48 protein 3 5268 Malvidae
Araha.1164s0005.1.p A. halleri v1.1 124250896 ATPase, AAA-type, CDC48 protein 3 5268 Malvidae
Cagra.0612s0046.1.p C. grandiflora v1.1 124250896 ATPase, AAA-type, CDC48 protein 3 5268 Malvidae