Gene : Carub.0006s0215 C. rubella v1.1
Defline:  (1 of 3) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) Genomic Order:  215
Name:  ? Carub.0006s0215 Secondary Identifier:  ? PAC:39246646
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0215 0.5kb upstream 0.5kb upstream 4240 true scaffold_6: 776599-780838 Capsella rubella
Carub.0006s0215 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 780339-780838 Capsella rubella
Carub.0006s0215 0.5kb downstream 0.5kb downstream 4240 true scaffold_6: 776099-780338 Capsella rubella
Carub.0006s0215 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 776099-776598 Capsella rubella
Carub.0006s0215 1.0kb upstream 1.0kb upstream 4740 true scaffold_6: 776599-781338 Capsella rubella
Carub.0006s0215 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 780339-781338 Capsella rubella
Carub.0006s0215 1.0kb downstream 1.0kb downstream 4740 true scaffold_6: 775599-780338 Capsella rubella
Carub.0006s0215 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 775599-776598 Capsella rubella
Carub.0006s0215 2.0kb upstream 2.0kb upstream 5740 true scaffold_6: 776599-782338 Capsella rubella
Carub.0006s0215 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 780339-782338 Capsella rubella
Carub.0006s0215 2.0kb downstream 2.0kb downstream 5740 true scaffold_6: 774599-780338 Capsella rubella
Carub.0006s0215 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 774599-776598 Capsella rubella
Carub.0006s0215 5.0kb upstream 5.0kb upstream 8740 true scaffold_6: 776599-785338 Capsella rubella
Carub.0006s0215 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 780339-785338 Capsella rubella
Carub.0006s0215 5.0kb downstream 5.0kb downstream 8740 true scaffold_6: 771599-780338 Capsella rubella
Carub.0006s0215 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 771599-776598 Capsella rubella
Carub.0006s0215 10.0kb upstream 10.0kb upstream 13740 true scaffold_6: 776599-790338 Capsella rubella
Carub.0006s0215 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 780339-790338 Capsella rubella
Carub.0006s0215 10.0kb downstream 10.0kb downstream 13740 true scaffold_6: 766599-780338 Capsella rubella
Carub.0006s0215 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 766599-776598 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362151 5261 Brassicaceae View MSA
123838879 5264 Brassicales-Malvales View MSA
124336663 5266 SBM View MSA
124250896 5268 Malvidae View MSA
124066929 5270 Rosid View MSA
123746983 5271 Pentapetalae View MSA
122795799 5272 Eudicot View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain