Protein : AL6G25340.t1 A. lyrata v2.1

Secondary Identifier:  PAC:35926007 Organism Name:  Arabidopsis lyrata
Length:  992   Name:  AL6G25340.t1
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Proteins

9 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR020568 Domain Ribosomal protein S5 domain 2-type fold
IPR004088 Domain K Homology domain, type 1
IPR003029 Domain S1 domain
IPR022967 Domain RNA-binding domain, S1
IPR015847 Domain Exoribonuclease, phosphorolytic domain 2
IPR012162 Family Polyribonucleotide nucleotidyltransferase
IPR015848 Domain Polyribonucleotide nucleotidyltransferase, RNA-binding domain
IPR001247 Domain Exoribonuclease, phosphorolytic domain 1
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
AL6G25340.t1_CDS 2979   scaffold_6: 5883376-5888695 Arabidopsis lyrata

34 Ontology Annotations

Ontology Term Db Gene/Protein Name
TIGR03591 TIGRFAMs AL6G25340.t1
SSF55666 SSF AL6G25340.t1
SSF54791 SSF AL6G25340.t1
SSF54211 SSF AL6G25340.t1
SSF50249 SSF AL6G25340.t1
SSF46915 SSF AL6G25340.t1
SM00316 SMART AL6G25340.t1
PS50126 PROFILE AL6G25340.t1
PS50084 PROFILE AL6G25340.t1
PF03726 PFAM AL6G25340.t1
PF03725 PFAM AL6G25340.t1
PF01138 PFAM AL6G25340.t1
PF00575 PFAM AL6G25340.t1
PF00013 PFAM AL6G25340.t1
PTHR11252:SF3 PANTHER AL6G25340.t1
PTHR11252 PANTHER AL6G25340.t1
K00962 KEGG AL6G25340.t1
IPR022967 InterPro AL6G25340.t1
IPR020568 InterPro AL6G25340.t1
IPR015848 InterPro AL6G25340.t1
IPR015847 InterPro AL6G25340.t1
IPR012340 InterPro AL6G25340.t1
IPR012162 InterPro AL6G25340.t1
IPR004088 InterPro AL6G25340.t1
IPR003029 InterPro AL6G25340.t1
IPR001247 InterPro AL6G25340.t1
GO:0006402 GO AL6G25340.t1
GO:0006396 GO AL6G25340.t1
GO:0004654 GO AL6G25340.t1
GO:0003723 GO AL6G25340.t1

0 Pathway Components

0 Pathways