Gene : AL6G45300 A. lyrata v2.1
Defline:  (1 of 1) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 Genomic Order:  3268
Name:  ? AL6G45300 Secondary Identifier:  ? PAC:35927317
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G45300 0.5kb upstream 0.5kb upstream 4696   true scaffold_6: 20764172-20768867 Arabidopsis lyrata
AL6G45300 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 20764172-20764671 Arabidopsis lyrata
AL6G45300 0.5kb downstream 0.5kb downstream 4696   true scaffold_6: 20764672-20769367 Arabidopsis lyrata
AL6G45300 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 20768868-20769367 Arabidopsis lyrata
AL6G45300 1.0kb upstream 1.0kb upstream 5196   true scaffold_6: 20763672-20768867 Arabidopsis lyrata
AL6G45300 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 20763672-20764671 Arabidopsis lyrata
AL6G45300 1.0kb downstream 1.0kb downstream 5196   true scaffold_6: 20764672-20769867 Arabidopsis lyrata
AL6G45300 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 20768868-20769867 Arabidopsis lyrata
AL6G45300 2.0kb upstream 2.0kb upstream 6196   true scaffold_6: 20762672-20768867 Arabidopsis lyrata
AL6G45300 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 20762672-20764671 Arabidopsis lyrata
AL6G45300 2.0kb downstream 2.0kb downstream 6196   true scaffold_6: 20764672-20770867 Arabidopsis lyrata
AL6G45300 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 20768868-20770867 Arabidopsis lyrata
AL6G45300 5.0kb upstream 5.0kb upstream 9196   true scaffold_6: 20759672-20768867 Arabidopsis lyrata
AL6G45300 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 20759672-20764671 Arabidopsis lyrata
AL6G45300 5.0kb downstream 5.0kb downstream 9196   true scaffold_6: 20764672-20773867 Arabidopsis lyrata
AL6G45300 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 20768868-20773867 Arabidopsis lyrata
AL6G45300 10.0kb upstream 10.0kb upstream 14196   true scaffold_6: 20754672-20768867 Arabidopsis lyrata
AL6G45300 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 20754672-20764671 Arabidopsis lyrata
AL6G45300 10.0kb downstream 10.0kb downstream 14196   true scaffold_6: 20764672-20778867 Arabidopsis lyrata
AL6G45300 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 20768868-20778867 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368937 5261 Brassicaceae View MSA
123830340 5264 Brassicales-Malvales View MSA
124321664 5266 SBM View MSA
124240918 5268 Malvidae View MSA
124065042 5270 Rosid View MSA
123747025 5271 Pentapetalae View MSA
122788970 5272 Eudicot View MSA
122044390 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain