Gene : Tp57577_TGAC_v2_gene6177 T. pratense v2
Defline:  (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Genomic Order:  682
Name:  ? Tp57577_TGAC_v2_gene6177 Secondary Identifier:  ? PAC:35963871
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6177 0.5kb upstream 0.5kb upstream 3362 true Tp57577_TGAC_v2_LG4: 6238333-6241694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 6238333-6238832 Trifolium pratense
Tp57577_TGAC_v2_gene6177 0.5kb downstream 0.5kb downstream 3362 true Tp57577_TGAC_v2_LG4: 6238833-6242194 Trifolium pratense
Tp57577_TGAC_v2_gene6177 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 6241695-6242194 Trifolium pratense
Tp57577_TGAC_v2_gene6177 1.0kb upstream 1.0kb upstream 3862 true Tp57577_TGAC_v2_LG4: 6237833-6241694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 6237833-6238832 Trifolium pratense
Tp57577_TGAC_v2_gene6177 1.0kb downstream 1.0kb downstream 3862 true Tp57577_TGAC_v2_LG4: 6238833-6242694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 6241695-6242694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 2.0kb upstream 2.0kb upstream 4862 true Tp57577_TGAC_v2_LG4: 6236833-6241694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 6236833-6238832 Trifolium pratense
Tp57577_TGAC_v2_gene6177 2.0kb downstream 2.0kb downstream 4862 true Tp57577_TGAC_v2_LG4: 6238833-6243694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 6241695-6243694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 5.0kb upstream 5.0kb upstream 7862 true Tp57577_TGAC_v2_LG4: 6233833-6241694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 6233833-6238832 Trifolium pratense
Tp57577_TGAC_v2_gene6177 5.0kb downstream 5.0kb downstream 7862 true Tp57577_TGAC_v2_LG4: 6238833-6246694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 6241695-6246694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 10.0kb upstream 10.0kb upstream 12862 true Tp57577_TGAC_v2_LG4: 6228833-6241694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 6228833-6238832 Trifolium pratense
Tp57577_TGAC_v2_gene6177 10.0kb downstream 10.0kb downstream 12862 true Tp57577_TGAC_v2_LG4: 6238833-6251694 Trifolium pratense
Tp57577_TGAC_v2_gene6177 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 6241695-6251694 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288571 5265 Fabidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain