Gene : Tp57577_TGAC_v2_gene15523 T. pratense v2
Defline:  (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) Genomic Order:  2505
Name:  ? Tp57577_TGAC_v2_gene15523 Secondary Identifier:  ? PAC:35975254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15523 0.5kb upstream 0.5kb upstream 3665 true Tp57577_TGAC_v2_LG6: 21484854-21488518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 21484854-21485353 Trifolium pratense
Tp57577_TGAC_v2_gene15523 0.5kb downstream 0.5kb downstream 3665 true Tp57577_TGAC_v2_LG6: 21485354-21489018 Trifolium pratense
Tp57577_TGAC_v2_gene15523 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 21488519-21489018 Trifolium pratense
Tp57577_TGAC_v2_gene15523 1.0kb upstream 1.0kb upstream 4165 true Tp57577_TGAC_v2_LG6: 21484354-21488518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 21484354-21485353 Trifolium pratense
Tp57577_TGAC_v2_gene15523 1.0kb downstream 1.0kb downstream 4165 true Tp57577_TGAC_v2_LG6: 21485354-21489518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 21488519-21489518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 2.0kb upstream 2.0kb upstream 5165 true Tp57577_TGAC_v2_LG6: 21483354-21488518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 21483354-21485353 Trifolium pratense
Tp57577_TGAC_v2_gene15523 2.0kb downstream 2.0kb downstream 5165 true Tp57577_TGAC_v2_LG6: 21485354-21490518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 21488519-21490518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 5.0kb upstream 5.0kb upstream 8165 true Tp57577_TGAC_v2_LG6: 21480354-21488518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 21480354-21485353 Trifolium pratense
Tp57577_TGAC_v2_gene15523 5.0kb downstream 5.0kb downstream 8165 true Tp57577_TGAC_v2_LG6: 21485354-21493518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 21488519-21493518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 10.0kb upstream 10.0kb upstream 13165 true Tp57577_TGAC_v2_LG6: 21475354-21488518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 21475354-21485353 Trifolium pratense
Tp57577_TGAC_v2_gene15523 10.0kb downstream 10.0kb downstream 13165 true Tp57577_TGAC_v2_LG6: 21485354-21498518 Trifolium pratense
Tp57577_TGAC_v2_gene15523 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 21488519-21498518 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306317 5265 Fabidae View MSA
124062766 5270 Rosid View MSA
123737498 5271 Pentapetalae View MSA
122787562 5272 Eudicot View MSA
122047377 5273 Angiosperm View MSA
121348028 5274 Embryophyte View MSA
123380709 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain