Gene : Tp57577_TGAC_v2_gene3138 T. pratense v2
Defline:  (1 of 5) K11699 - RNA-dependent RNA polymerase [EC:2.7.7.48] (RDR, RDRP) Genomic Order:  1406
Name:  ? Tp57577_TGAC_v2_gene3138 Secondary Identifier:  ? PAC:35958607
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3138 0.5kb upstream 0.5kb upstream 6042 true Tp57577_TGAC_v2_LG7: 11068483-11074524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 11068483-11068982 Trifolium pratense
Tp57577_TGAC_v2_gene3138 0.5kb downstream 0.5kb downstream 6042 true Tp57577_TGAC_v2_LG7: 11068983-11075024 Trifolium pratense
Tp57577_TGAC_v2_gene3138 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 11074525-11075024 Trifolium pratense
Tp57577_TGAC_v2_gene3138 1.0kb upstream 1.0kb upstream 6542 true Tp57577_TGAC_v2_LG7: 11067983-11074524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 11067983-11068982 Trifolium pratense
Tp57577_TGAC_v2_gene3138 1.0kb downstream 1.0kb downstream 6542 true Tp57577_TGAC_v2_LG7: 11068983-11075524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 11074525-11075524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 2.0kb upstream 2.0kb upstream 7542 true Tp57577_TGAC_v2_LG7: 11066983-11074524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 11066983-11068982 Trifolium pratense
Tp57577_TGAC_v2_gene3138 2.0kb downstream 2.0kb downstream 7542 true Tp57577_TGAC_v2_LG7: 11068983-11076524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 11074525-11076524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 5.0kb upstream 5.0kb upstream 10542 true Tp57577_TGAC_v2_LG7: 11063983-11074524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 11063983-11068982 Trifolium pratense
Tp57577_TGAC_v2_gene3138 5.0kb downstream 5.0kb downstream 10542 true Tp57577_TGAC_v2_LG7: 11068983-11079524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 11074525-11079524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 10.0kb upstream 10.0kb upstream 15542 true Tp57577_TGAC_v2_LG7: 11058983-11074524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 11058983-11068982 Trifolium pratense
Tp57577_TGAC_v2_gene3138 10.0kb downstream 10.0kb downstream 15542 true Tp57577_TGAC_v2_LG7: 11068983-11084524 Trifolium pratense
Tp57577_TGAC_v2_gene3138 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 11074525-11084524 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303620 5265 Fabidae View MSA
124063849 5270 Rosid View MSA
123737046 5271 Pentapetalae View MSA
122789317 5272 Eudicot View MSA
122045596 5273 Angiosperm View MSA
121346387 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain