Gene : Tp57577_TGAC_v2_gene8673 T. pratense v2
Defline:  (1 of 1) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2337
Name:  ? Tp57577_TGAC_v2_gene8673 Secondary Identifier:  ? PAC:35957150
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8673 0.5kb upstream 0.5kb upstream 2201 true Tp57577_TGAC_v2_LG7: 20429012-20431212 Trifolium pratense
Tp57577_TGAC_v2_gene8673 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 20430713-20431212 Trifolium pratense
Tp57577_TGAC_v2_gene8673 0.5kb downstream 0.5kb downstream 2201 true Tp57577_TGAC_v2_LG7: 20428512-20430712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 20428512-20429011 Trifolium pratense
Tp57577_TGAC_v2_gene8673 1.0kb upstream 1.0kb upstream 2701 true Tp57577_TGAC_v2_LG7: 20429012-20431712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 20430713-20431712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 1.0kb downstream 1.0kb downstream 2701 true Tp57577_TGAC_v2_LG7: 20428012-20430712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 20428012-20429011 Trifolium pratense
Tp57577_TGAC_v2_gene8673 2.0kb upstream 2.0kb upstream 3701 true Tp57577_TGAC_v2_LG7: 20429012-20432712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 20430713-20432712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 2.0kb downstream 2.0kb downstream 3701 true Tp57577_TGAC_v2_LG7: 20427012-20430712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 20427012-20429011 Trifolium pratense
Tp57577_TGAC_v2_gene8673 5.0kb upstream 5.0kb upstream 6701 true Tp57577_TGAC_v2_LG7: 20429012-20435712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 20430713-20435712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 5.0kb downstream 5.0kb downstream 6701 true Tp57577_TGAC_v2_LG7: 20424012-20430712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 20424012-20429011 Trifolium pratense
Tp57577_TGAC_v2_gene8673 10.0kb upstream 10.0kb upstream 11701 true Tp57577_TGAC_v2_LG7: 20429012-20440712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 20430713-20440712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 10.0kb downstream 10.0kb downstream 11701 true Tp57577_TGAC_v2_LG7: 20419012-20430712 Trifolium pratense
Tp57577_TGAC_v2_gene8673 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 20419012-20429011 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304332 5265 Fabidae View MSA
124062447 5270 Rosid View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain