Gene : Tp57577_TGAC_v2_gene23004 T. pratense v2
Defline:  (1 of 271) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene23004 Secondary Identifier:  ? PAC:35981666
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23004 0.5kb upstream 0.5kb upstream 1307 true Tp57577_TGAC_v2_scaf_948: 41069-42375 Trifolium pratense
Tp57577_TGAC_v2_gene23004 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_948: 41876-42375 Trifolium pratense
Tp57577_TGAC_v2_gene23004 0.5kb downstream 0.5kb downstream 1307 true Tp57577_TGAC_v2_scaf_948: 40569-41875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_948: 40569-41068 Trifolium pratense
Tp57577_TGAC_v2_gene23004 1.0kb upstream 1.0kb upstream 1807 true Tp57577_TGAC_v2_scaf_948: 41069-42875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_948: 41876-42875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 1.0kb downstream 1.0kb downstream 1807 true Tp57577_TGAC_v2_scaf_948: 40069-41875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_948: 40069-41068 Trifolium pratense
Tp57577_TGAC_v2_gene23004 2.0kb upstream 2.0kb upstream 2807 true Tp57577_TGAC_v2_scaf_948: 41069-43875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_948: 41876-43875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 2.0kb downstream 2.0kb downstream 2807 true Tp57577_TGAC_v2_scaf_948: 39069-41875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_948: 39069-41068 Trifolium pratense
Tp57577_TGAC_v2_gene23004 5.0kb upstream 5.0kb upstream 5807 true Tp57577_TGAC_v2_scaf_948: 41069-46875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_948: 41876-46875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 5.0kb downstream 5.0kb downstream 5807 true Tp57577_TGAC_v2_scaf_948: 36069-41875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_948: 36069-41068 Trifolium pratense
Tp57577_TGAC_v2_gene23004 10.0kb upstream 10.0kb upstream 10807 true Tp57577_TGAC_v2_scaf_948: 41069-51875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_948: 41876-51875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 10.0kb downstream 10.0kb downstream 10807 true Tp57577_TGAC_v2_scaf_948: 31069-41875 Trifolium pratense
Tp57577_TGAC_v2_gene23004 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_948: 31069-41068 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029855 5273 Angiosperm View MSA
122315290 5265 Fabidae View MSA
124038140 5270 Rosid View MSA
123753008 5271 Pentapetalae View MSA
122774914 5272 Eudicot View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain