Gene : Tp57577_TGAC_v2_gene20025 T. pratense v2
Defline:  (1 of 1) K11090 - lupus La protein (LA, SSB) Genomic Order:  1951
Name:  ? Tp57577_TGAC_v2_gene20025 Secondary Identifier:  ? PAC:35972980
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20025 0.5kb upstream 0.5kb upstream 5260 true Tp57577_TGAC_v2_LG2: 18799373-18804632 Trifolium pratense
Tp57577_TGAC_v2_gene20025 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 18804133-18804632 Trifolium pratense
Tp57577_TGAC_v2_gene20025 0.5kb downstream 0.5kb downstream 5260 true Tp57577_TGAC_v2_LG2: 18798873-18804132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 18798873-18799372 Trifolium pratense
Tp57577_TGAC_v2_gene20025 1.0kb upstream 1.0kb upstream 5760 true Tp57577_TGAC_v2_LG2: 18799373-18805132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 18804133-18805132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 1.0kb downstream 1.0kb downstream 5760 true Tp57577_TGAC_v2_LG2: 18798373-18804132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 18798373-18799372 Trifolium pratense
Tp57577_TGAC_v2_gene20025 2.0kb upstream 2.0kb upstream 6760 true Tp57577_TGAC_v2_LG2: 18799373-18806132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 18804133-18806132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 2.0kb downstream 2.0kb downstream 6760 true Tp57577_TGAC_v2_LG2: 18797373-18804132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 18797373-18799372 Trifolium pratense
Tp57577_TGAC_v2_gene20025 5.0kb upstream 5.0kb upstream 9760 true Tp57577_TGAC_v2_LG2: 18799373-18809132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 18804133-18809132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 5.0kb downstream 5.0kb downstream 9760 true Tp57577_TGAC_v2_LG2: 18794373-18804132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 18794373-18799372 Trifolium pratense
Tp57577_TGAC_v2_gene20025 10.0kb upstream 10.0kb upstream 14760 true Tp57577_TGAC_v2_LG2: 18799373-18814132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 18804133-18814132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 10.0kb downstream 10.0kb downstream 14760 true Tp57577_TGAC_v2_LG2: 18789373-18804132 Trifolium pratense
Tp57577_TGAC_v2_gene20025 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 18789373-18799372 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041135 5273 Angiosperm View MSA
122309017 5265 Fabidae View MSA
124064026 5270 Rosid View MSA
123746572 5271 Pentapetalae View MSA
122791313 5272 Eudicot View MSA
121349930 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain