Gene : Tp57577_TGAC_v2_gene36652 T. pratense v2
Defline:  (1 of 71) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  139
Name:  ? Tp57577_TGAC_v2_gene36652 Secondary Identifier:  ? PAC:35971679
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene36652 0.5kb upstream 0.5kb upstream 1149 true Tp57577_TGAC_v2_LG2: 1220644-1221792 Trifolium pratense
Tp57577_TGAC_v2_gene36652 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 1221293-1221792 Trifolium pratense
Tp57577_TGAC_v2_gene36652 0.5kb downstream 0.5kb downstream 1149 true Tp57577_TGAC_v2_LG2: 1220144-1221292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 1220144-1220643 Trifolium pratense
Tp57577_TGAC_v2_gene36652 1.0kb upstream 1.0kb upstream 1649 true Tp57577_TGAC_v2_LG2: 1220644-1222292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 1221293-1222292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 1.0kb downstream 1.0kb downstream 1649 true Tp57577_TGAC_v2_LG2: 1219644-1221292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 1219644-1220643 Trifolium pratense
Tp57577_TGAC_v2_gene36652 2.0kb upstream 2.0kb upstream 2649 true Tp57577_TGAC_v2_LG2: 1220644-1223292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 1221293-1223292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 2.0kb downstream 2.0kb downstream 2649 true Tp57577_TGAC_v2_LG2: 1218644-1221292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 1218644-1220643 Trifolium pratense
Tp57577_TGAC_v2_gene36652 5.0kb upstream 5.0kb upstream 5649 true Tp57577_TGAC_v2_LG2: 1220644-1226292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 1221293-1226292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 5.0kb downstream 5.0kb downstream 5649 true Tp57577_TGAC_v2_LG2: 1215644-1221292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 1215644-1220643 Trifolium pratense
Tp57577_TGAC_v2_gene36652 10.0kb upstream 10.0kb upstream 10649 true Tp57577_TGAC_v2_LG2: 1220644-1231292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 1221293-1231292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 10.0kb downstream 10.0kb downstream 10649 true Tp57577_TGAC_v2_LG2: 1210644-1221292 Trifolium pratense
Tp57577_TGAC_v2_gene36652 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 1210644-1220643 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298158 5265 Fabidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain