Gene : Tp57577_TGAC_v2_gene8097 T. pratense v2
Defline:  (1 of 2) PTHR30603:SF24 - RNA POLYMERASE SIGMA FACTOR SIGD, CHLOROPLASTIC Genomic Order:  1657
Name:  ? Tp57577_TGAC_v2_gene8097 Secondary Identifier:  ? PAC:35971371
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8097 0.5kb upstream 0.5kb upstream 2608 true Tp57577_TGAC_v2_LG2: 16029355-16031962 Trifolium pratense
Tp57577_TGAC_v2_gene8097 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 16031463-16031962 Trifolium pratense
Tp57577_TGAC_v2_gene8097 0.5kb downstream 0.5kb downstream 2608 true Tp57577_TGAC_v2_LG2: 16028855-16031462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 16028855-16029354 Trifolium pratense
Tp57577_TGAC_v2_gene8097 1.0kb upstream 1.0kb upstream 3108 true Tp57577_TGAC_v2_LG2: 16029355-16032462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 16031463-16032462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 1.0kb downstream 1.0kb downstream 3108 true Tp57577_TGAC_v2_LG2: 16028355-16031462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 16028355-16029354 Trifolium pratense
Tp57577_TGAC_v2_gene8097 2.0kb upstream 2.0kb upstream 4108 true Tp57577_TGAC_v2_LG2: 16029355-16033462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 16031463-16033462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 2.0kb downstream 2.0kb downstream 4108 true Tp57577_TGAC_v2_LG2: 16027355-16031462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 16027355-16029354 Trifolium pratense
Tp57577_TGAC_v2_gene8097 5.0kb upstream 5.0kb upstream 7108 true Tp57577_TGAC_v2_LG2: 16029355-16036462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 16031463-16036462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 5.0kb downstream 5.0kb downstream 7108 true Tp57577_TGAC_v2_LG2: 16024355-16031462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 16024355-16029354 Trifolium pratense
Tp57577_TGAC_v2_gene8097 10.0kb upstream 10.0kb upstream 12108 true Tp57577_TGAC_v2_LG2: 16029355-16041462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 16031463-16041462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 10.0kb downstream 10.0kb downstream 12108 true Tp57577_TGAC_v2_LG2: 16019355-16031462 Trifolium pratense
Tp57577_TGAC_v2_gene8097 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 16019355-16029354 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297400 5265 Fabidae View MSA
124036019 5270 Rosid View MSA
123609442 5271 Pentapetalae View MSA
122644090 5272 Eudicot View MSA
122048895 5273 Angiosperm View MSA
121311156 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain