Gene : Tp57577_TGAC_v2_gene6304 T. pratense v2
Defline:  (1 of 35) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3021
Name:  ? Tp57577_TGAC_v2_gene6304 Secondary Identifier:  ? PAC:35987494
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6304 0.5kb upstream 0.5kb upstream 3685 true Tp57577_TGAC_v2_LG3: 25514561-25518245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 25514561-25515060 Trifolium pratense
Tp57577_TGAC_v2_gene6304 0.5kb downstream 0.5kb downstream 3685 true Tp57577_TGAC_v2_LG3: 25515061-25518745 Trifolium pratense
Tp57577_TGAC_v2_gene6304 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 25518246-25518745 Trifolium pratense
Tp57577_TGAC_v2_gene6304 1.0kb upstream 1.0kb upstream 4185 true Tp57577_TGAC_v2_LG3: 25514061-25518245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 25514061-25515060 Trifolium pratense
Tp57577_TGAC_v2_gene6304 1.0kb downstream 1.0kb downstream 4185 true Tp57577_TGAC_v2_LG3: 25515061-25519245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 25518246-25519245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 2.0kb upstream 2.0kb upstream 5185 true Tp57577_TGAC_v2_LG3: 25513061-25518245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 25513061-25515060 Trifolium pratense
Tp57577_TGAC_v2_gene6304 2.0kb downstream 2.0kb downstream 5185 true Tp57577_TGAC_v2_LG3: 25515061-25520245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 25518246-25520245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 5.0kb upstream 5.0kb upstream 8185 true Tp57577_TGAC_v2_LG3: 25510061-25518245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 25510061-25515060 Trifolium pratense
Tp57577_TGAC_v2_gene6304 5.0kb downstream 5.0kb downstream 8185 true Tp57577_TGAC_v2_LG3: 25515061-25523245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 25518246-25523245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 10.0kb upstream 10.0kb upstream 13185 true Tp57577_TGAC_v2_LG3: 25505061-25518245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 25505061-25515060 Trifolium pratense
Tp57577_TGAC_v2_gene6304 10.0kb downstream 10.0kb downstream 13185 true Tp57577_TGAC_v2_LG3: 25515061-25528245 Trifolium pratense
Tp57577_TGAC_v2_gene6304 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 25518246-25528245 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310036 5265 Fabidae View MSA
124070457 5270 Rosid View MSA
123736471 5271 Pentapetalae View MSA
122786011 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain