Gene : Tp57577_TGAC_v2_gene12676 T. pratense v2
Defline:  (1 of 9) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  264
Name:  ? Tp57577_TGAC_v2_gene12676 Secondary Identifier:  ? PAC:35964584
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12676 0.5kb upstream 0.5kb upstream 4991 true Tp57577_TGAC_v2_LG4: 2205048-2210038 Trifolium pratense
Tp57577_TGAC_v2_gene12676 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 2209539-2210038 Trifolium pratense
Tp57577_TGAC_v2_gene12676 0.5kb downstream 0.5kb downstream 4991 true Tp57577_TGAC_v2_LG4: 2204548-2209538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 2204548-2205047 Trifolium pratense
Tp57577_TGAC_v2_gene12676 1.0kb upstream 1.0kb upstream 5491 true Tp57577_TGAC_v2_LG4: 2205048-2210538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 2209539-2210538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 1.0kb downstream 1.0kb downstream 5491 true Tp57577_TGAC_v2_LG4: 2204048-2209538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 2204048-2205047 Trifolium pratense
Tp57577_TGAC_v2_gene12676 2.0kb upstream 2.0kb upstream 6491 true Tp57577_TGAC_v2_LG4: 2205048-2211538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 2209539-2211538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 2.0kb downstream 2.0kb downstream 6491 true Tp57577_TGAC_v2_LG4: 2203048-2209538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 2203048-2205047 Trifolium pratense
Tp57577_TGAC_v2_gene12676 5.0kb upstream 5.0kb upstream 9491 true Tp57577_TGAC_v2_LG4: 2205048-2214538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 2209539-2214538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 5.0kb downstream 5.0kb downstream 9491 true Tp57577_TGAC_v2_LG4: 2200048-2209538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 2200048-2205047 Trifolium pratense
Tp57577_TGAC_v2_gene12676 10.0kb upstream 10.0kb upstream 14491 true Tp57577_TGAC_v2_LG4: 2205048-2219538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 2209539-2219538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 10.0kb downstream 10.0kb downstream 14491 true Tp57577_TGAC_v2_LG4: 2195048-2209538 Trifolium pratense
Tp57577_TGAC_v2_gene12676 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 2195048-2205047 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314325 5265 Fabidae View MSA
124063626 5270 Rosid View MSA
123737447 5271 Pentapetalae View MSA
122788593 5272 Eudicot View MSA
122046976 5273 Angiosperm View MSA
121346361 5274 Embryophyte View MSA
123380372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain