Gene : Solyc04g008700.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12824 - transcription elongation regulator 1 (TCERG1, CA150) Description:  Pre-mRNA-processing factor 40 homolog A (AHRD V1 *--- PR40A_HUMAN); contains Interpro domain(s) IPR002713 FF domain
Genomic Order:  271 Name:  ? Solyc04g008700.2
Secondary Identifier:  ? PAC:36142257
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g008700.2 0.5kb upstream 0.5kb upstream 18758 true SL2.50ch04: 2359994-2378751 Solanum lycopersicum
Solyc04g008700.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 2359994-2360493 Solanum lycopersicum
Solyc04g008700.2 0.5kb downstream 0.5kb downstream 18758 true SL2.50ch04: 2360494-2379251 Solanum lycopersicum
Solyc04g008700.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 2378752-2379251 Solanum lycopersicum
Solyc04g008700.2 1.0kb upstream 1.0kb upstream 19258 true SL2.50ch04: 2359494-2378751 Solanum lycopersicum
Solyc04g008700.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 2359494-2360493 Solanum lycopersicum
Solyc04g008700.2 1.0kb downstream 1.0kb downstream 19258 true SL2.50ch04: 2360494-2379751 Solanum lycopersicum
Solyc04g008700.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 2378752-2379751 Solanum lycopersicum
Solyc04g008700.2 2.0kb upstream 2.0kb upstream 20258 true SL2.50ch04: 2358494-2378751 Solanum lycopersicum
Solyc04g008700.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 2358494-2360493 Solanum lycopersicum
Solyc04g008700.2 2.0kb downstream 2.0kb downstream 20258 true SL2.50ch04: 2360494-2380751 Solanum lycopersicum
Solyc04g008700.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 2378752-2380751 Solanum lycopersicum
Solyc04g008700.2 5.0kb upstream 5.0kb upstream 23258 true SL2.50ch04: 2355494-2378751 Solanum lycopersicum
Solyc04g008700.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 2355494-2360493 Solanum lycopersicum
Solyc04g008700.2 5.0kb downstream 5.0kb downstream 23258 true SL2.50ch04: 2360494-2383751 Solanum lycopersicum
Solyc04g008700.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 2378752-2383751 Solanum lycopersicum
Solyc04g008700.2 10.0kb upstream 10.0kb upstream 28258 true SL2.50ch04: 2350494-2378751 Solanum lycopersicum
Solyc04g008700.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 2350494-2360493 Solanum lycopersicum
Solyc04g008700.2 10.0kb downstream 10.0kb downstream 28258 true SL2.50ch04: 2360494-2388751 Solanum lycopersicum
Solyc04g008700.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 2378752-2388751 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471661 5263 Asterids View MSA
123739157 5271 Pentapetalae View MSA
122793255 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain