Gene : Solyc10g084160.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED Description:  RNA exonuclease (AHRD V1 *-*- C0S8V0_PARBP); contains Interpro domain(s) IPR006055 Exonuclease
Genomic Order:  2283 Name:  ? Solyc10g084160.1
Secondary Identifier:  ? PAC:36156233
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g084160.1 0.5kb upstream 0.5kb upstream 5127 true SL2.50ch10: 63826733-63831859 Solanum lycopersicum
Solyc10g084160.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 63826733-63827232 Solanum lycopersicum
Solyc10g084160.1 0.5kb downstream 0.5kb downstream 5127 true SL2.50ch10: 63827233-63832359 Solanum lycopersicum
Solyc10g084160.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 63831860-63832359 Solanum lycopersicum
Solyc10g084160.1 1.0kb upstream 1.0kb upstream 5627 true SL2.50ch10: 63826233-63831859 Solanum lycopersicum
Solyc10g084160.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 63826233-63827232 Solanum lycopersicum
Solyc10g084160.1 1.0kb downstream 1.0kb downstream 5627 true SL2.50ch10: 63827233-63832859 Solanum lycopersicum
Solyc10g084160.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 63831860-63832859 Solanum lycopersicum
Solyc10g084160.1 2.0kb upstream 2.0kb upstream 6627 true SL2.50ch10: 63825233-63831859 Solanum lycopersicum
Solyc10g084160.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 63825233-63827232 Solanum lycopersicum
Solyc10g084160.1 2.0kb downstream 2.0kb downstream 6627 true SL2.50ch10: 63827233-63833859 Solanum lycopersicum
Solyc10g084160.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 63831860-63833859 Solanum lycopersicum
Solyc10g084160.1 5.0kb upstream 5.0kb upstream 9627 true SL2.50ch10: 63822233-63831859 Solanum lycopersicum
Solyc10g084160.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 63822233-63827232 Solanum lycopersicum
Solyc10g084160.1 5.0kb downstream 5.0kb downstream 9627 true SL2.50ch10: 63827233-63836859 Solanum lycopersicum
Solyc10g084160.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 63831860-63836859 Solanum lycopersicum
Solyc10g084160.1 10.0kb upstream 10.0kb upstream 14627 true SL2.50ch10: 63817233-63831859 Solanum lycopersicum
Solyc10g084160.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 63817233-63827232 Solanum lycopersicum
Solyc10g084160.1 10.0kb downstream 10.0kb downstream 14627 true SL2.50ch10: 63827233-63841859 Solanum lycopersicum
Solyc10g084160.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 63831860-63841859 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041485 5273 Angiosperm View MSA
121473461 5263 Asterids View MSA
123743566 5271 Pentapetalae View MSA
122785750 5272 Eudicot View MSA
121348164 5274 Embryophyte View MSA
123427779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain