Gene : Solyc04g063340.1 S. lycopersicum ITAG2.4
Defline:  (1 of 174) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L041_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  1680 Name:  ? Solyc04g063340.1
Secondary Identifier:  ? PAC:36142781
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g063340.1 0.5kb upstream 0.5kb upstream 2504 true SL2.50ch04: 55446870-55449373 Solanum lycopersicum
Solyc04g063340.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 55446870-55447369 Solanum lycopersicum
Solyc04g063340.1 0.5kb downstream 0.5kb downstream 2504 true SL2.50ch04: 55447370-55449873 Solanum lycopersicum
Solyc04g063340.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 55449374-55449873 Solanum lycopersicum
Solyc04g063340.1 1.0kb upstream 1.0kb upstream 3004 true SL2.50ch04: 55446370-55449373 Solanum lycopersicum
Solyc04g063340.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 55446370-55447369 Solanum lycopersicum
Solyc04g063340.1 1.0kb downstream 1.0kb downstream 3004 true SL2.50ch04: 55447370-55450373 Solanum lycopersicum
Solyc04g063340.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 55449374-55450373 Solanum lycopersicum
Solyc04g063340.1 2.0kb upstream 2.0kb upstream 4004 true SL2.50ch04: 55445370-55449373 Solanum lycopersicum
Solyc04g063340.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 55445370-55447369 Solanum lycopersicum
Solyc04g063340.1 2.0kb downstream 2.0kb downstream 4004 true SL2.50ch04: 55447370-55451373 Solanum lycopersicum
Solyc04g063340.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 55449374-55451373 Solanum lycopersicum
Solyc04g063340.1 5.0kb upstream 5.0kb upstream 7004 true SL2.50ch04: 55442370-55449373 Solanum lycopersicum
Solyc04g063340.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 55442370-55447369 Solanum lycopersicum
Solyc04g063340.1 5.0kb downstream 5.0kb downstream 7004 true SL2.50ch04: 55447370-55454373 Solanum lycopersicum
Solyc04g063340.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 55449374-55454373 Solanum lycopersicum
Solyc04g063340.1 10.0kb upstream 10.0kb upstream 12004 true SL2.50ch04: 55437370-55449373 Solanum lycopersicum
Solyc04g063340.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 55437370-55447369 Solanum lycopersicum
Solyc04g063340.1 10.0kb downstream 10.0kb downstream 12004 true SL2.50ch04: 55447370-55459373 Solanum lycopersicum
Solyc04g063340.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 55449374-55459373 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466382 5263 Asterids View MSA
123736471 5271 Pentapetalae View MSA
122786011 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain