Gene : Solyc04g049140.2 S. lycopersicum ITAG2.4
Defline:  (1 of 8) K15601 - lysine-specific demethylase 3 [EC:1.14.11.-] (KDM3) Description:  Transcription factor jumonji domain-containing protein (AHRD V1 **-* D7M504_ARALY); contains Interpro domain(s) IPR013129 Transcription factor jumonji
Genomic Order:  1191 Name:  ? Solyc04g049140.2
Secondary Identifier:  ? PAC:36143247
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g049140.2 0.5kb upstream 0.5kb upstream 19465 true SL2.50ch04: 39819946-39839410 Solanum lycopersicum
Solyc04g049140.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 39838911-39839410 Solanum lycopersicum
Solyc04g049140.2 0.5kb downstream 0.5kb downstream 19465 true SL2.50ch04: 39819446-39838910 Solanum lycopersicum
Solyc04g049140.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 39819446-39819945 Solanum lycopersicum
Solyc04g049140.2 1.0kb upstream 1.0kb upstream 19965 true SL2.50ch04: 39819946-39839910 Solanum lycopersicum
Solyc04g049140.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 39838911-39839910 Solanum lycopersicum
Solyc04g049140.2 1.0kb downstream 1.0kb downstream 19965 true SL2.50ch04: 39818946-39838910 Solanum lycopersicum
Solyc04g049140.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 39818946-39819945 Solanum lycopersicum
Solyc04g049140.2 2.0kb upstream 2.0kb upstream 20965 true SL2.50ch04: 39819946-39840910 Solanum lycopersicum
Solyc04g049140.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 39838911-39840910 Solanum lycopersicum
Solyc04g049140.2 2.0kb downstream 2.0kb downstream 20965 true SL2.50ch04: 39817946-39838910 Solanum lycopersicum
Solyc04g049140.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 39817946-39819945 Solanum lycopersicum
Solyc04g049140.2 5.0kb upstream 5.0kb upstream 23965 true SL2.50ch04: 39819946-39843910 Solanum lycopersicum
Solyc04g049140.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 39838911-39843910 Solanum lycopersicum
Solyc04g049140.2 5.0kb downstream 5.0kb downstream 23965 true SL2.50ch04: 39814946-39838910 Solanum lycopersicum
Solyc04g049140.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 39814946-39819945 Solanum lycopersicum
Solyc04g049140.2 10.0kb upstream 10.0kb upstream 28965 true SL2.50ch04: 39819946-39848910 Solanum lycopersicum
Solyc04g049140.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 39838911-39848910 Solanum lycopersicum
Solyc04g049140.2 10.0kb downstream 10.0kb downstream 28965 true SL2.50ch04: 39809946-39838910 Solanum lycopersicum
Solyc04g049140.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 39809946-39819945 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480798 5263 Asterids View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain