Gene : Solyc04g077520.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 Description:  RNA binding protein (AHRD V1 **-* Q9C652_ARATH); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait
Genomic Order:  2199 Name:  ? Solyc04g077520.2
Secondary Identifier:  ? PAC:36143106
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g077520.2 0.5kb upstream 0.5kb upstream 2215 true SL2.50ch04: 62477053-62479267 Solanum lycopersicum
Solyc04g077520.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 62478768-62479267 Solanum lycopersicum
Solyc04g077520.2 0.5kb downstream 0.5kb downstream 2215 true SL2.50ch04: 62476553-62478767 Solanum lycopersicum
Solyc04g077520.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 62476553-62477052 Solanum lycopersicum
Solyc04g077520.2 1.0kb upstream 1.0kb upstream 2715 true SL2.50ch04: 62477053-62479767 Solanum lycopersicum
Solyc04g077520.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 62478768-62479767 Solanum lycopersicum
Solyc04g077520.2 1.0kb downstream 1.0kb downstream 2715 true SL2.50ch04: 62476053-62478767 Solanum lycopersicum
Solyc04g077520.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 62476053-62477052 Solanum lycopersicum
Solyc04g077520.2 2.0kb upstream 2.0kb upstream 3715 true SL2.50ch04: 62477053-62480767 Solanum lycopersicum
Solyc04g077520.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 62478768-62480767 Solanum lycopersicum
Solyc04g077520.2 2.0kb downstream 2.0kb downstream 3715 true SL2.50ch04: 62475053-62478767 Solanum lycopersicum
Solyc04g077520.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 62475053-62477052 Solanum lycopersicum
Solyc04g077520.2 5.0kb upstream 5.0kb upstream 6715 true SL2.50ch04: 62477053-62483767 Solanum lycopersicum
Solyc04g077520.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 62478768-62483767 Solanum lycopersicum
Solyc04g077520.2 5.0kb downstream 5.0kb downstream 6715 true SL2.50ch04: 62472053-62478767 Solanum lycopersicum
Solyc04g077520.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 62472053-62477052 Solanum lycopersicum
Solyc04g077520.2 10.0kb upstream 10.0kb upstream 11715 true SL2.50ch04: 62477053-62488767 Solanum lycopersicum
Solyc04g077520.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 62478768-62488767 Solanum lycopersicum
Solyc04g077520.2 10.0kb downstream 10.0kb downstream 11715 true SL2.50ch04: 62467053-62478767 Solanum lycopersicum
Solyc04g077520.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 62467053-62477052 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471152 5263 Asterids View MSA
123742464 5271 Pentapetalae View MSA
122794211 5272 Eudicot View MSA
122048542 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain